Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SNORD113-7-201ENST00000363762 77 ntBASIC2.26□□□□□ -2.05
SNX3O60493 RNU6-1210P-201ENST00000363775 107 ntBASIC2.26□□□□□ -2.05
SNX3O60493 SNORD46.1-201ENST00000364139 104 ntBASIC2.26□□□□□ -2.05
SNX3O60493 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNX3O60493 RNU6-43P-201ENST00000384302 107 ntBASIC2.26□□□□□ -2.05
SNX3O60493 Y_RNA.530-201ENST00000384587 101 ntBASIC2.26□□□□□ -2.05
SNX3O60493 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SNX3O60493 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
SNX3O60493 RNA5SP118-201ENST00000410385 109 ntBASIC2.26□□□□□ -2.05
SNX3O60493 RNU6-1148P-201ENST00000410992 104 ntBASIC2.26□□□□□ -2.05
SNX3O60493 COTL1P1-201ENST00000422309 375 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.26□□□□□ -2.05
SNX3O60493 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.26□□□□□ -2.05
SNX3O60493 AC124916.1-201ENST00000444020 547 ntBASIC2.26□□□□□ -2.05
SNX3O60493 FGF7P6-202ENST00000451282 293 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.26□□□□□ -2.05
SNX3O60493 AF213884.2-201ENST00000510417 903 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.26□□□□□ -2.05
SNX3O60493 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.26□□□□□ -2.05
SNX3O60493 AC109329.2-201ENST00000519658 482 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AC093732.2-201ENST00000607950 274 ntBASIC2.26□□□□□ -2.05
SNX3O60493 AL442067.2-201ENST00000614033 363 ntBASIC2.26□□□□□ -2.05
SNX3O60493 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
SNX3O60493 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.26□□□□□ -2.05
SNX3O60493 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.26□□□□□ -2.05
SNX3O60493 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SNX3O60493 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SNX3O60493 Y_RNA.100-201ENST00000363141 102 ntBASIC2.25□□□□□ -2.05
SNX3O60493 RNU6-1285P-201ENST00000363480 105 ntBASIC2.25□□□□□ -2.05
SNX3O60493 RNU6-214P-201ENST00000384130 107 ntBASIC2.25□□□□□ -2.05
SNX3O60493 MIR518C-201ENST00000384822 101 ntBASIC2.25□□□□□ -2.05
SNX3O60493 RNU6-1106P-201ENST00000390845 107 ntBASIC2.25□□□□□ -2.05
SNX3O60493 VN1R36P-201ENST00000414936 291 ntBASIC2.25□□□□□ -2.05
SNX3O60493 ZNF885P-201ENST00000420174 1098 ntBASIC2.25□□□□□ -2.05
SNX3O60493 AL513185.2-201ENST00000425543 193 ntBASIC2.25□□□□□ -2.05
SNX3O60493 RPS15AP10-201ENST00000432472 382 ntBASIC2.25□□□□□ -2.05
SNX3O60493 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
SNX3O60493 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.25□□□□□ -2.05
SNX3O60493 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.25□□□□□ -2.05
SNX3O60493 RNU6-1037P-201ENST00000459571 107 ntBASIC2.25□□□□□ -2.05
SNX3O60493 S100A11P2-201ENST00000467589 312 ntBASIC2.25□□□□□ -2.05
SNX3O60493 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.25□□□□□ -2.05
SNX3O60493 RPL30P1-201ENST00000488676 339 ntBASIC2.25□□□□□ -2.05
SNX3O60493 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.25□□□□□ -2.05
SNX3O60493 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.25□□□□□ -2.05
SNX3O60493 TRAV32-201ENST00000553993 340 ntBASIC2.25□□□□□ -2.05
SNX3O60493 SNORA59B-202ENST00000578183 701 ntBASIC2.25□□□□□ -2.05
SNX3O60493 MIR5694-201ENST00000581190 76 ntBASIC2.25□□□□□ -2.05
SNX3O60493 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
SNX3O60493 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.25□□□□□ -2.05
SNX3O60493 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.25□□□□□ -2.05
SNX3O60493 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
SNX3O60493 AL449363.1-201ENST00000617815 186 ntBASIC2.25□□□□□ -2.05
SNX3O60493 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SNX3O60493 Y_RNA.157-201ENST00000363638 102 ntBASIC2.24□□□□□ -2.05
SNX3O60493 SNORD32A-201ENST00000364805 84 ntBASIC2.24□□□□□ -2.05
SNX3O60493 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SNX3O60493 Y_RNA.414-201ENST00000384011 101 ntBASIC2.24□□□□□ -2.05
SNX3O60493 CBX3P9-201ENST00000402326 552 ntBASIC2.24□□□□□ -2.05
SNX3O60493 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SNX3O60493 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.24□□□□□ -2.05
SNX3O60493 MTCO3P18-201ENST00000440206 761 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AL353752.1-201ENST00000454946 260 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AMD1P1-201ENST00000457220 922 ntBASIC2.24□□□□□ -2.05
SNX3O60493 CKS1BP2-201ENST00000497342 240 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.24□□□□□ -2.05
SNX3O60493 RNU6-1314P-201ENST00000517139 104 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AC022080.3-201ENST00000544433 482 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AC100830.2-201ENST00000581636 240 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AP001836.1-201ENST00000604675 523 ntBASIC2.24□□□□□ -2.05
SNX3O60493 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SNX3O60493 AC068944.2-201ENST00000610373 403 ntBASIC2.24□□□□□ -2.05
SNX3O60493 AC006504.8-201ENST00000621046 635 ntBASIC2.24□□□□□ -2.05
SNX3O60493 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SNX3O60493 MTND4P23-201ENST00000447723 1363 ntBASIC2.23□□□□□ -2.05
SNX3O60493 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SNX3O60493 RNU6-859P-201ENST00000362728 107 ntBASIC2.23□□□□□ -2.05
SNX3O60493 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
SNX3O60493 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNX3O60493 RNU2-63P-201ENST00000410792 194 ntBASIC2.23□□□□□ -2.05
SNX3O60493 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.23□□□□□ -2.05
SNX3O60493 UBE2V1P4-201ENST00000425374 344 ntBASIC2.23□□□□□ -2.05
SNX3O60493 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
SNX3O60493 MTATP6P13-201ENST00000438531 667 ntBASIC2.23□□□□□ -2.05
SNX3O60493 AL161788.1-201ENST00000441805 169 ntBASIC2.23□□□□□ -2.05
SNX3O60493 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.23□□□□□ -2.05
SNX3O60493 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.23□□□□□ -2.05
SNX3O60493 RPL23AP7-203ENST00000449021 469 ntBASIC2.23□□□□□ -2.05
SNX3O60493 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.23□□□□□ -2.05
SNX3O60493 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.23□□□□□ -2.05
SNX3O60493 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.23□□□□□ -2.05
SNX3O60493 AC091874.1-201ENST00000511402 339 ntBASIC2.23□□□□□ -2.05
SNX3O60493 RNU5F-2P-201ENST00000516066 82 ntBASIC2.23□□□□□ -2.05
SNX3O60493 RNU6-256P-201ENST00000516747 97 ntBASIC2.23□□□□□ -2.05
SNX3O60493 AC026371.1-201ENST00000551867 419 ntBASIC2.23□□□□□ -2.05
SNX3O60493 IMMP1LP2-201ENST00000552954 492 ntBASIC2.23□□□□□ -2.05
SNX3O60493 MIR3672-201ENST00000584290 82 ntBASIC2.23□□□□□ -2.05
SNX3O60493 AL355297.2-201ENST00000604792 129 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms