Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AF186996.7-201ENST00000492781 209 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 SNORA70.19-201ENST00000516717 90 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.41□□□□□ -1.86
KDM1AO60341 AL117187.1-201ENST00000555482 181 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.41□□□□□ -1.86
KDM1AO60341 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.41□□□□□ -1.86
KDM1AO60341 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.41□□□□□ -1.86
KDM1AO60341 AC010928.2-201ENST00000588017 287 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 AC016727.2-201ENST00000603988 621 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 AC008121.3-201ENST00000618726 433 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 MIR6075-201ENST00000620782 95 ntBASIC3.41□□□□□ -1.86
KDM1AO60341 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KDM1AO60341 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
KDM1AO60341 AL353743.1-202ENST00000431724 1695 ntBASIC3.4□□□□□ -1.86
KDM1AO60341 AC058791.1-201ENST00000608412 3198 ntBASIC3.4□□□□□ -1.86
KDM1AO60341 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
KDM1AO60341 AC092268.1-201ENST00000342691 405 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 Y_RNA.133-201ENST00000363428 110 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 SNORD115-32-201ENST00000364079 82 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 RNU6-450P-201ENST00000364654 107 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 MIR628-201ENST00000385229 95 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 RNU6-823P-201ENST00000391042 103 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 MIR548F4-201ENST00000408515 105 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 Y_RNA.592-201ENST00000410274 109 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.4□□□□□ -1.87
KDM1AO60341 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC091286.1-201ENST00000431233 461 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 BX679664.1-201ENST00000434429 253 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC004383.1-201ENST00000438135 289 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 GPM6BP3-201ENST00000442797 145 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC009296.1-201ENST00000443146 155 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 RPL30P12-201ENST00000474666 353 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 GZMAP1-201ENST00000503054 631 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 FCF1P8-201ENST00000510322 597 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 RNU6-911P-201ENST00000516523 104 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC022616.4-201ENST00000522985 181 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 AC007375.1-201ENST00000554513 578 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 MIR5571-201ENST00000577998 113 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 RPS15AP11-201ENST00000594193 385 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 U2.1-201ENST00000618978 145 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
KDM1AO60341 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.4□□□□□ -1.87
KDM1AO60341 AP000560.1-201ENST00000624150 1937 ntBASIC3.4□□□□□ -1.87
KDM1AO60341 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KDM1AO60341 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KDM1AO60341 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
KDM1AO60341 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KDM1AO60341 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KDM1AO60341 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
KDM1AO60341 AC068647.1-201ENST00000489539 2265 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 SNORA29-201ENST00000384183 140 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 MIR23B-201ENST00000384832 97 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AL133475.1-201ENST00000404414 305 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 RNU6-1140P-201ENST00000410517 106 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.39□□□□□ -1.87
KDM1AO60341 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KDM1AO60341 AC244670.1-201ENST00000436879 112 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
KDM1AO60341 CYCSP35-201ENST00000451978 304 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AC087477.1-201ENST00000465747 340 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.39□□□□□ -1.87
KDM1AO60341 RPL22P13-201ENST00000493291 347 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AC093852.1-201ENST00000503587 266 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.39□□□□□ -1.87
KDM1AO60341 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AC105137.2-201ENST00000569073 466 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AL355877.2-201ENST00000603670 358 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 Z98751.3-201ENST00000604447 521 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 AL132822.1-201ENST00000617063 513 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 U4.6-201ENST00000621618 127 ntBASIC3.39□□□□□ -1.87
KDM1AO60341 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.39□□□□□ -1.87
KDM1AO60341 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.39□□□□□ -1.87
KDM1AO60341 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KDM1AO60341 ZNF72P-201ENST00000425869 1908 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
KDM1AO60341 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KDM1AO60341 AC073073.2-201ENST00000609827 2578 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AL049781.1-201ENST00000623195 3585 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 RNU5B-2P-201ENST00000363036 113 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 RNU6-1285P-201ENST00000363480 105 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 Y_RNA.144-201ENST00000363521 113 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 SNORD14.1-201ENST00000365609 90 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 Y_RNA.526-201ENST00000384572 110 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 SNORA26.3-201ENST00000391119 136 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KDM1AO60341 AC104332.2-201ENST00000429959 156 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 OR2AQ1P-201ENST00000451972 200 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 RBMY2UP-201ENST00000453474 324 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 TOMM22P6-201ENST00000465035 409 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 RPS27P26-201ENST00000494583 239 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AC091144.1-201ENST00000519573 138 ntBASIC3.38□□□□□ -1.87
KDM1AO60341 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.38□□□□□ -1.87
KDM1AO60341 AC021231.3-201ENST00000558497 370 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms