Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.43□□□□□ -2.02
SSX4O60224 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.43□□□□□ -2.02
SSX4O60224 AC008267.5-201ENST00000424928 265 ntBASIC2.43□□□□□ -2.02
SSX4O60224 SNAP23P1-201ENST00000433229 246 ntBASIC2.43□□□□□ -2.02
SSX4O60224 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.43□□□□□ -2.02
SSX4O60224 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.43□□□□□ -2.02
SSX4O60224 RPL32P28-201ENST00000443577 397 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AC108938.1-201ENST00000451204 136 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.43□□□□□ -2.02
SSX4O60224 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RNU4-49P-201ENST00000516080 140 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RNU6-864P-201ENST00000516256 108 ntBASIC2.43□□□□□ -2.02
SSX4O60224 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RNU6-273P-201ENST00000516937 96 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RN7SKP256-201ENST00000517201 314 ntBASIC2.43□□□□□ -2.02
SSX4O60224 HPRT1P3-201ENST00000539521 576 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AC079600.2-201ENST00000550076 130 ntBASIC2.43□□□□□ -2.02
SSX4O60224 TRAV32-201ENST00000553993 340 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.43□□□□□ -2.02
SSX4O60224 AL138726.1-201ENST00000614873 333 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AL159153.1-201ENST00000619688 317 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AC009248.2-201ENST00000619826 254 ntBASIC2.43□□□□□ -2.02
SSX4O60224 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
SSX4O60224 AC092593.1-201ENST00000515413 1815 ntBASIC2.42□□□□□ -2.02
SSX4O60224 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.42□□□□□ -2.02
SSX4O60224 MTND4P23-201ENST00000447723 1363 ntBASIC2.42□□□□□ -2.02
SSX4O60224 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
SSX4O60224 RNU6-1222P-201ENST00000384615 107 ntBASIC2.42□□□□□ -2.02
SSX4O60224 RNU6-876P-201ENST00000391295 104 ntBASIC2.42□□□□□ -2.02
SSX4O60224 AC104389.3-201ENST00000445629 235 ntBASIC2.42□□□□□ -2.02
SSX4O60224 AL109933.2-201ENST00000452651 260 ntBASIC2.42□□□□□ -2.02
SSX4O60224 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.42□□□□□ -2.02
SSX4O60224 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
SSX4O60224 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
SSX4O60224 SNRPGP7-201ENST00000469016 106 ntBASIC2.42□□□□□ -2.02
SSX4O60224 MTCO2P30-201ENST00000503662 364 ntBASIC2.42□□□□□ -2.02
SSX4O60224 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
SSX4O60224 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.42□□□□□ -2.02
SSX4O60224 AP000889.2-201ENST00000532684 490 ntBASIC2.42□□□□□ -2.02
SSX4O60224 MIR4435-1-201ENST00000582552 80 ntBASIC2.42□□□□□ -2.02
SSX4O60224 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX4O60224 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.42□□□□□ -2.02
SSX4O60224 AC096644.4-201ENST00000563417 2912 ntBASIC2.41□□□□□ -2.02
SSX4O60224 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
SSX4O60224 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX4O60224 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSX4O60224 Y_RNA.135-201ENST00000363439 95 ntBASIC2.41□□□□□ -2.02
SSX4O60224 U3.13-201ENST00000364804 214 ntBASIC2.41□□□□□ -2.02
SSX4O60224 MT-TL1-201ENST00000386347 75 ntBASIC2.41□□□□□ -2.02
SSX4O60224 FGF7P8-201ENST00000402994 292 ntBASIC2.41□□□□□ -2.02
SSX4O60224 RNU2-52P-201ENST00000410680 190 ntBASIC2.41□□□□□ -2.02
SSX4O60224 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
SSX4O60224 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX4O60224 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX4O60224 USP9YP8-201ENST00000441913 500 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX4O60224 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.41□□□□□ -2.02
SSX4O60224 AL031659.1-201ENST00000447075 539 ntBASIC2.41□□□□□ -2.02
SSX4O60224 EEF1B2P7-201ENST00000451177 676 ntBASIC2.41□□□□□ -2.02
SSX4O60224 snoU13.14-201ENST00000459372 104 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC090515.1-201ENST00000465295 476 ntBASIC2.41□□□□□ -2.02
SSX4O60224 RPL9P9-202ENST00000466501 579 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX4O60224 AC096745.1-201ENST00000509945 370 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX4O60224 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX4O60224 SCOCP1-201ENST00000554676 349 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.41□□□□□ -2.02
SSX4O60224 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX4O60224 AC027176.1-201ENST00000560204 514 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX4O60224 MIR5571-201ENST00000577998 113 ntBASIC2.41□□□□□ -2.02
SSX4O60224 MIR3124-201ENST00000582636 67 ntBASIC2.41□□□□□ -2.02
SSX4O60224 MIR3605-201ENST00000583214 100 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC091135.1-201ENST00000585943 307 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC011712.1-201ENST00000588959 234 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC023043.2-201ENST00000589678 1026 ntBASIC2.41□□□□□ -2.02
SSX4O60224 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.41□□□□□ -2.02
SSX4O60224 AP001836.1-201ENST00000604675 523 ntBASIC2.41□□□□□ -2.02
SSX4O60224 AC013412.1-201ENST00000610687 192 ntBASIC2.41□□□□□ -2.02
SSX4O60224 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
SSX4O60224 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SSX4O60224 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSX4O60224 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SSX4O60224 RNU6-655P-201ENST00000362858 107 ntBASIC2.4□□□□□ -2.03
SSX4O60224 Y_RNA.72-201ENST00000362894 103 ntBASIC2.4□□□□□ -2.03
SSX4O60224 Y_RNA.160-201ENST00000363677 92 ntBASIC2.4□□□□□ -2.03
SSX4O60224 Y_RNA.212-201ENST00000364177 102 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RNU6-1317P-201ENST00000364582 104 ntBASIC2.4□□□□□ -2.03
SSX4O60224 SNORD32A-201ENST00000364805 84 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSX4O60224 RNU6-43P-201ENST00000384302 107 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RNU6-510P-201ENST00000391239 108 ntBASIC2.4□□□□□ -2.03
SSX4O60224 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSX4O60224 AL590632.1-201ENST00000424289 371 ntBASIC2.4□□□□□ -2.03
SSX4O60224 AIMP1P2-201ENST00000425294 312 ntBASIC2.4□□□□□ -2.03
SSX4O60224 ARL5AP4-201ENST00000430731 512 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.4□□□□□ -2.03
SSX4O60224 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms