Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RN7SKP282-201ENST00000516824 299 ntBASIC2.78□□□□□ -1.96
LDB2O43679 AP003072.1-201ENST00000531740 145 ntBASIC2.78□□□□□ -1.96
LDB2O43679 AC010186.2-204ENST00000537668 439 ntBASIC2.78□□□□□ -1.96
LDB2O43679 AC021739.1-201ENST00000559631 174 ntBASIC2.78□□□□□ -1.96
LDB2O43679 AC005899.2-201ENST00000584353 90 ntBASIC2.78□□□□□ -1.96
LDB2O43679 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.812-201ENST00000610788 101 ntBASIC2.78□□□□□ -1.96
LDB2O43679 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.784-201ENST00000613803 101 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.787-201ENST00000616522 101 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.780-201ENST00000617336 101 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.801-201ENST00000619005 101 ntBASIC2.78□□□□□ -1.96
LDB2O43679 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB2O43679 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LDB2O43679 ADAM3A-203ENST00000461344 2157 ntBASIC2.78□□□□□ -1.96
LDB2O43679 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.96
LDB2O43679 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
LDB2O43679 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
LDB2O43679 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.77□□□□□ -1.97
LDB2O43679 RNU6-105P-201ENST00000363909 104 ntBASIC2.77□□□□□ -1.97
LDB2O43679 Y_RNA.326-201ENST00000365176 113 ntBASIC2.77□□□□□ -1.97
LDB2O43679 U8.8-201ENST00000365399 135 ntBASIC2.77□□□□□ -1.97
LDB2O43679 Y_RNA.445-201ENST00000384168 102 ntBASIC2.77□□□□□ -1.97
LDB2O43679 RNU6-474P-201ENST00000384243 107 ntBASIC2.77□□□□□ -1.97
LDB2O43679 RNA5SP252-201ENST00000391131 119 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AL590004.1-201ENST00000405321 300 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB2O43679 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB2O43679 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.77□□□□□ -1.97
LDB2O43679 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB2O43679 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB2O43679 AL031183.1-201ENST00000457667 207 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC133134.1-201ENST00000466800 359 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB2O43679 AC114801.2-201ENST00000503825 781 ntBASIC2.77□□□□□ -1.97
LDB2O43679 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AP005902.1-201ENST00000521358 186 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC006199.1-201ENST00000548728 219 ntBASIC2.77□□□□□ -1.97
LDB2O43679 GTF3AP2-201ENST00000557014 266 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC020895.1-201ENST00000595362 272 ntBASIC2.77□□□□□ -1.97
LDB2O43679 SNRPGP17-201ENST00000603780 214 ntBASIC2.77□□□□□ -1.97
LDB2O43679 MIR3976-201ENST00000606807 139 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC011890.2-201ENST00000613393 294 ntBASIC2.77□□□□□ -1.97
LDB2O43679 AC092608.2-201ENST00000624427 218 ntBASIC2.77□□□□□ -1.97
LDB2O43679 MIR3199-2-201ENST00000636243 86 ntBASIC2.77□□□□□ -1.97
LDB2O43679 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LDB2O43679 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.76□□□□□ -1.97
LDB2O43679 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LDB2O43679 RNU6-1280P-201ENST00000365211 107 ntBASIC2.76□□□□□ -1.97
LDB2O43679 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
LDB2O43679 MIR1289-1-201ENST00000408836 144 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RNU6-174P-201ENST00000410406 106 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
LDB2O43679 Z82205.1-201ENST00000428456 297 ntBASIC2.76□□□□□ -1.97
LDB2O43679 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.76□□□□□ -1.97
LDB2O43679 AC124916.1-201ENST00000444020 547 ntBASIC2.76□□□□□ -1.97
LDB2O43679 MIR2053-201ENST00000459295 91 ntBASIC2.76□□□□□ -1.97
LDB2O43679 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RPL23AP49-201ENST00000492925 468 ntBASIC2.76□□□□□ -1.97
LDB2O43679 AC116655.1-201ENST00000508324 901 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RPL23AP94-201ENST00000512518 302 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RNU6-976P-201ENST00000516086 111 ntBASIC2.76□□□□□ -1.97
LDB2O43679 SCARNA16.2-201ENST00000516520 172 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RNA5SP384-201ENST00000516615 116 ntBASIC2.76□□□□□ -1.97
LDB2O43679 RNU6-612P-201ENST00000516909 102 ntBASIC2.76□□□□□ -1.97
LDB2O43679 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
LDB2O43679 MIR3171-201ENST00000584270 74 ntBASIC2.76□□□□□ -1.97
LDB2O43679 AC078795.3-201ENST00000602913 472 ntBASIC2.76□□□□□ -1.97
LDB2O43679 MIR8076-201ENST00000611401 83 ntBASIC2.76□□□□□ -1.97
LDB2O43679 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
LDB2O43679 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LDB2O43679 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.76□□□□□ -1.97
LDB2O43679 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LDB2O43679 MTND4P27-201ENST00000450813 1354 ntBASIC2.75□□□□□ -1.97
LDB2O43679 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
LDB2O43679 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB2O43679 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.75□□□□□ -1.97
LDB2O43679 RNU6-1115P-201ENST00000362490 106 ntBASIC2.75□□□□□ -1.97
LDB2O43679 Y_RNA.112-201ENST00000363250 102 ntBASIC2.75□□□□□ -1.97
LDB2O43679 RNU6-527P-201ENST00000363425 104 ntBASIC2.75□□□□□ -1.97
LDB2O43679 RNU1-112P-201ENST00000364401 164 ntBASIC2.75□□□□□ -1.97
LDB2O43679 SNORA41-201ENST00000384675 132 ntBASIC2.75□□□□□ -1.97
LDB2O43679 RNU6-331P-201ENST00000384724 107 ntBASIC2.75□□□□□ -1.97
LDB2O43679 MIR521-1-201ENST00000384902 87 ntBASIC2.75□□□□□ -1.97
LDB2O43679 MIR559-201ENST00000385188 96 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AL591034.2-201ENST00000402839 359 ntBASIC2.75□□□□□ -1.97
LDB2O43679 FTH1P15-201ENST00000406984 280 ntBASIC2.75□□□□□ -1.97
LDB2O43679 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB2O43679 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
LDB2O43679 RPS15AP5-201ENST00000436276 388 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.75□□□□□ -1.97
LDB2O43679 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB2O43679 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB2O43679 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB2O43679 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AC090525.1-201ENST00000479116 478 ntBASIC2.75□□□□□ -1.97
LDB2O43679 MRPL42P6-201ENST00000486397 371 ntBASIC2.75□□□□□ -1.97
LDB2O43679 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.75□□□□□ -1.97
LDB2O43679 RNU6-581P-201ENST00000516214 105 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms