Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
PRPF3O43395 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.29□□□□□ -1.88
PRPF3O43395 Y_RNA.675-201ENST00000516389 149 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 RNU6-1016P-201ENST00000516689 94 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 AL355375.2-201ENST00000574825 175 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.29□□□□□ -1.88
PRPF3O43395 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.29□□□□□ -1.88
PRPF3O43395 AC113139.1-201ENST00000605049 239 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF3O43395 AL159153.1-201ENST00000619688 317 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF3O43395 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.29□□□□□ -1.88
PRPF3O43395 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF3O43395 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
PRPF3O43395 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF3O43395 Y_RNA.61-201ENST00000362835 102 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 RNU4-56P-201ENST00000364700 142 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 Y_RNA.500-201ENST00000384466 111 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 MIR517A-201ENST00000385001 87 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 AC104332.2-201ENST00000429959 156 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 AL133396.1-201ENST00000432048 687 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 RPS15AP7-201ENST00000439294 405 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 AC112771.1-201ENST00000463581 102 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF3O43395 RNU6-307P-201ENST00000516743 106 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 RNU6-567P-201ENST00000516746 107 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC069294.1-201ENST00000608397 350 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 AC069234.5-201ENST00000611056 416 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 MIR6128-201ENST00000615528 109 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 AC090617.7-201ENST00000623952 126 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PRPF3O43395 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF3O43395 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.28□□□□□ -1.88
PRPF3O43395 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.28□□□□□ -1.88
PRPF3O43395 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PRPF3O43395 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.28□□□□□ -1.88
PRPF3O43395 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PRPF3O43395 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF3O43395 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PRPF3O43395 RNU6-1210P-201ENST00000363775 107 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 Y_RNA.384-201ENST00000383909 102 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 MIR627-201ENST00000384979 97 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 AL591034.2-201ENST00000402839 359 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 EIF4EP2-201ENST00000422816 654 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF3O43395 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF3O43395 Z96811.1-201ENST00000445880 108 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF3O43395 EEF1B2P7-201ENST00000451177 676 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 SNORD5.1-201ENST00000458800 75 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.27□□□□□ -1.89
PRPF3O43395 AC093027.1-201ENST00000546698 429 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.27□□□□□ -1.89
PRPF3O43395 MIR4795-201ENST00000584182 89 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 AC016727.1-205ENST00000605437 569 ntBASIC3.27□□□□□ -1.89
PRPF3O43395 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF3O43395 MTND4P27-201ENST00000450813 1354 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 MTND4P29-201ENST00000503122 1372 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRPF3O43395 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF3O43395 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 RNU6-1285P-201ENST00000363480 105 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 Y_RNA.151-201ENST00000363566 112 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 U8.8-201ENST00000365399 135 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 SNORA18.3-201ENST00000384122 132 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 MIR181A2-201ENST00000384863 110 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 MIR186-201ENST00000384988 86 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 AC236972.1-201ENST00000433225 199 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 AL135938.1-201ENST00000443141 297 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 AC009296.1-201ENST00000443146 155 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF3O43395 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.26□□□□□ -1.89
PRPF3O43395 AC021231.3-201ENST00000558497 370 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 AC097372.5-201ENST00000623665 376 ntBASIC3.26□□□□□ -1.89
PRPF3O43395 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PRPF3O43395 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.26□□□□□ -1.89
PRPF3O43395 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.25□□□□□ -1.89
PRPF3O43395 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PRPF3O43395 SNORD32A-201ENST00000364805 84 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 Y_RNA.387-201ENST00000383918 102 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RNU6-43P-201ENST00000384302 107 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RNU6-784P-201ENST00000384330 106 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RNU6-692P-201ENST00000384496 107 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RNU6-601P-201ENST00000384540 107 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RNU6-306P-201ENST00000384617 107 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 CBX3P9-201ENST00000402326 552 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RNU4-14P-201ENST00000410858 122 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.25□□□□□ -1.89
PRPF3O43395 EIF4EP4-201ENST00000424916 578 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 AC244670.1-201ENST00000436879 112 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RPS29P27-201ENST00000463711 170 ntBASIC3.25□□□□□ -1.89
PRPF3O43395 RPL30P1-201ENST00000488676 339 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms