Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-768P-201ENST00000384683 107 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 MIR3065-201ENST00000390137 79 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 SNORA11F-201ENST00000408237 128 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 RNA5SP129-201ENST00000410276 118 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA2O43364 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA2O43364 AC027124.2-201ENST00000428249 105 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AL161651.1-201ENST00000440882 223 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC004386.2-201ENST00000441858 148 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 Z75741.1-201ENST00000446793 314 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA2O43364 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXA2O43364 FCF1P8-201ENST00000510322 597 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA2O43364 CYCSP29-201ENST00000533731 318 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC127455.1-201ENST00000565496 145 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXA2O43364 PCGEM1.1-201ENST00000613431 131 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC073308.1-201ENST00000623696 305 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AL136164.4-201ENST00000625013 2135 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC140479.6-201ENST00000633535 357 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 AC007656.2-201ENST00000624902 4547 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA2O43364 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA2O43364 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA2O43364 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA2O43364 RNA5SP28-201ENST00000363841 119 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 RNU6-270P-201ENST00000364131 105 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 Y_RNA.310-201ENST00000365063 113 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 Y_RNA.393-201ENST00000383936 102 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 MT-TT-201ENST00000387460 66 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXA2O43364 RNA5SP201-201ENST00000410316 124 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA2O43364 AL714022.1-201ENST00000439897 151 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA2O43364 RNU7-107P-201ENST00000459121 61 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 RN7SL812P-201ENST00000493791 279 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 SNORA70.12-201ENST00000516084 153 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HOXA2O43364 EIF4A1P12-201ENST00000551910 141 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 MIR3690-201ENST00000580266 75 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 MIR5006-201ENST00000583027 110 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 VN1R85P-201ENST00000601587 426 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 AC024220.1-201ENST00000603675 484 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXA2O43364 MIR6129-201ENST00000616087 109 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA2O43364 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HOXA2O43364 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA2O43364 ZNF702P-202ENST00000434269 1966 ntBASIC4.82□□□□□ -1.64
HOXA2O43364 AC068254.2-201ENST00000623938 3577 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA2O43364 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA2O43364 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 MIR383-201ENST00000362257 73 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 RNU1-94P-201ENST00000362627 173 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 SNORA75.5-201ENST00000391291 81 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 HSPE1P26-201ENST00000405341 275 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 RNA5SP170-201ENST00000517150 101 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 AC079587.1-201ENST00000603846 277 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 MIR492-201ENST00000638676 116 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 LINC01355-201ENST00000566551 5444 ntBASIC4.81□□□□□ -1.64
HOXA2O43364 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA2O43364 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA2O43364 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA2O43364 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA2O43364 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXA2O43364 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA2O43364 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA2O43364 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXA2O43364 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA2O43364 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA2O43364 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXA2O43364 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXA2O43364 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA2O43364 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA2O43364 RNA5SP388-201ENST00000362584 119 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 RNU6-1144P-201ENST00000384247 104 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 AC004866.1-201ENST00000411748 78 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 AL353748.1-201ENST00000440753 474 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 HSPE1P13-201ENST00000451143 297 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 AC016925.1-201ENST00000458303 298 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 RPS29P2-201ENST00000479278 136 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXA2O43364 Y_RNA.709-201ENST00000516952 92 ntBASIC4.8□□□□□ -1.64
HOXA2O43364 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA2O43364 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA2O43364 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA2O43364 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA2O43364 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXA2O43364 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA2O43364 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms