Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC063976.3-201ENST00000426849 329 ntBASIC2.45□□□□□ -2.02
TO15178 RPL30P4-201ENST00000429309 333 ntBASIC2.45□□□□□ -2.02
TO15178 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.45□□□□□ -2.02
TO15178 IFNA20P-201ENST00000436840 528 ntBASIC2.45□□□□□ -2.02
TO15178 AC243964.1-201ENST00000441814 261 ntBASIC2.45□□□□□ -2.02
TO15178 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.45□□□□□ -2.02
TO15178 RPL7P12-201ENST00000446719 750 ntBASIC2.45□□□□□ -2.02
TO15178 RPL39P29-201ENST00000447779 157 ntBASIC2.45□□□□□ -2.02
TO15178 AC080013.2-201ENST00000460866 323 ntBASIC2.45□□□□□ -2.02
TO15178 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.45□□□□□ -2.02
TO15178 RNA5SP356-201ENST00000515972 94 ntBASIC2.45□□□□□ -2.02
TO15178 RNU6-864P-201ENST00000516256 108 ntBASIC2.45□□□□□ -2.02
TO15178 AC107953.1-201ENST00000522216 297 ntBASIC2.45□□□□□ -2.02
TO15178 AP000889.2-201ENST00000532684 490 ntBASIC2.45□□□□□ -2.02
TO15178 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.45□□□□□ -2.02
TO15178 MIR3672-201ENST00000584290 82 ntBASIC2.45□□□□□ -2.02
TO15178 AC069294.1-201ENST00000608397 350 ntBASIC2.45□□□□□ -2.02
TO15178 AL138726.1-201ENST00000614873 333 ntBASIC2.45□□□□□ -2.02
TO15178 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.45□□□□□ -2.02
TO15178 ZNF271P-202ENST00000465539 1970 ntBASIC2.45□□□□□ -2.02
TO15178 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TO15178 Y_RNA.160-201ENST00000363677 92 ntBASIC2.44□□□□□ -2.02
TO15178 AL356057.3-201ENST00000402607 340 ntBASIC2.44□□□□□ -2.02
TO15178 RNU6-1140P-201ENST00000410517 106 ntBASIC2.44□□□□□ -2.02
TO15178 AL645568.3-201ENST00000433683 316 ntBASIC2.44□□□□□ -2.02
TO15178 CR769767.1-201ENST00000436337 346 ntBASIC2.44□□□□□ -2.02
TO15178 RPL32P28-201ENST00000443577 397 ntBASIC2.44□□□□□ -2.02
TO15178 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
TO15178 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.44□□□□□ -2.02
TO15178 SNORD109B-201ENST00000458961 67 ntBASIC2.44□□□□□ -2.02
TO15178 SNORD109A-201ENST00000459128 67 ntBASIC2.44□□□□□ -2.02
TO15178 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.44□□□□□ -2.02
TO15178 RPL30P12-201ENST00000474666 353 ntBASIC2.44□□□□□ -2.02
TO15178 AC096745.1-201ENST00000509945 370 ntBASIC2.44□□□□□ -2.02
TO15178 AC096725.1-201ENST00000514266 313 ntBASIC2.44□□□□□ -2.02
TO15178 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.44□□□□□ -2.02
TO15178 AC087241.2-201ENST00000535801 324 ntBASIC2.44□□□□□ -2.02
TO15178 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.44□□□□□ -2.02
TO15178 AC027176.1-201ENST00000560204 514 ntBASIC2.44□□□□□ -2.02
TO15178 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.44□□□□□ -2.02
TO15178 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.44□□□□□ -2.02
TO15178 MIR5571-201ENST00000577998 113 ntBASIC2.44□□□□□ -2.02
TO15178 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.44□□□□□ -2.02
TO15178 AC105245.1-201ENST00000581934 244 ntBASIC2.44□□□□□ -2.02
TO15178 MIR4635-201ENST00000583759 79 ntBASIC2.44□□□□□ -2.02
TO15178 AC023043.2-201ENST00000589678 1026 ntBASIC2.44□□□□□ -2.02
TO15178 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.44□□□□□ -2.02
TO15178 AL356157.2-201ENST00000605122 111 ntBASIC2.44□□□□□ -2.02
TO15178 AC241585.2-209ENST00000638217 143 ntBASIC2.44□□□□□ -2.02
TO15178 AC099654.14-201ENST00000638599 341 ntBASIC2.44□□□□□ -2.02
TO15178 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TO15178 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
TO15178 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
TO15178 RNU6-562P-201ENST00000362731 107 ntBASIC2.43□□□□□ -2.02
TO15178 Y_RNA.212-201ENST00000364177 102 ntBASIC2.43□□□□□ -2.02
TO15178 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.43□□□□□ -2.02
TO15178 SNORD116-11-201ENST00000383882 92 ntBASIC2.43□□□□□ -2.02
TO15178 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
TO15178 EIF4EP4-201ENST00000424916 578 ntBASIC2.43□□□□□ -2.02
TO15178 MTCO3P46-201ENST00000425787 232 ntBASIC2.43□□□□□ -2.02
TO15178 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.43□□□□□ -2.02
TO15178 SNAP23P1-201ENST00000433229 246 ntBASIC2.43□□□□□ -2.02
TO15178 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.43□□□□□ -2.02
TO15178 AC011816.1-201ENST00000441346 546 ntBASIC2.43□□□□□ -2.02
TO15178 MRPL50P4-201ENST00000446432 475 ntBASIC2.43□□□□□ -2.02
TO15178 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.43□□□□□ -2.02
TO15178 AMD1P1-201ENST00000457220 922 ntBASIC2.43□□□□□ -2.02
TO15178 U8.21-201ENST00000459536 136 ntBASIC2.43□□□□□ -2.02
TO15178 RPL9P9-202ENST00000466501 579 ntBASIC2.43□□□□□ -2.02
TO15178 MTCO2P30-201ENST00000503662 364 ntBASIC2.43□□□□□ -2.02
TO15178 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.43□□□□□ -2.02
TO15178 RNU4-49P-201ENST00000516080 140 ntBASIC2.43□□□□□ -2.02
TO15178 TRAV32-201ENST00000553993 340 ntBASIC2.43□□□□□ -2.02
TO15178 SCOCP1-201ENST00000554676 349 ntBASIC2.43□□□□□ -2.02
TO15178 MIR3942-201ENST00000585264 109 ntBASIC2.43□□□□□ -2.02
TO15178 AL022345.1-201ENST00000607292 135 ntBASIC2.43□□□□□ -2.02
TO15178 DUXAP9-208ENST00000622815 614 ntBASIC2.43□□□□□ -2.02
TO15178 MTND4P23-201ENST00000447723 1363 ntBASIC2.43□□□□□ -2.02
TO15178 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TO15178 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TO15178 CBX3P1-201ENST00000325243 554 ntBASIC2.42□□□□□ -2.02
TO15178 RNU6-212P-201ENST00000362642 104 ntBASIC2.42□□□□□ -2.02
TO15178 RNU6-529P-201ENST00000363383 104 ntBASIC2.42□□□□□ -2.02
TO15178 Y_RNA.135-201ENST00000363439 95 ntBASIC2.42□□□□□ -2.02
TO15178 RNU6-767P-201ENST00000384132 107 ntBASIC2.42□□□□□ -2.02
TO15178 RNU6-692P-201ENST00000384496 107 ntBASIC2.42□□□□□ -2.02
TO15178 MIR186-201ENST00000384988 86 ntBASIC2.42□□□□□ -2.02
TO15178 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TO15178 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TO15178 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.42□□□□□ -2.02
TO15178 CYCSP48-201ENST00000417124 323 ntBASIC2.42□□□□□ -2.02
TO15178 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.42□□□□□ -2.02
TO15178 RPL21P111-201ENST00000418453 477 ntBASIC2.42□□□□□ -2.02
TO15178 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
TO15178 AC236972.1-201ENST00000433225 199 ntBASIC2.42□□□□□ -2.02
TO15178 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.42□□□□□ -2.02
TO15178 RNU6-329P-201ENST00000459618 107 ntBASIC2.42□□□□□ -2.02
TO15178 MTCO1P29-201ENST00000496868 288 ntBASIC2.42□□□□□ -2.02
TO15178 AC114801.2-201ENST00000503825 781 ntBASIC2.42□□□□□ -2.02
TO15178 AC008526.1-201ENST00000509149 338 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms