Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.68□□□□□ -1.98
ATP2A1O14983 AL513185.2-201ENST00000425543 193 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AC018634.1-201ENST00000437554 401 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AC004383.1-201ENST00000438135 289 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.68□□□□□ -1.98
ATP2A1O14983 AL359672.1-201ENST00000442302 409 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AC013470.1-201ENST00000453438 462 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 RPL23AP49-201ENST00000492925 468 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AC018710.1-201ENST00000506509 158 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.68□□□□□ -1.98
ATP2A1O14983 SCARNA17.1-201ENST00000516211 143 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 SCARNA17.2-201ENST00000516334 143 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 RNU5B-3P-201ENST00000516601 115 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.68□□□□□ -1.98
ATP2A1O14983 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.68□□□□□ -1.98
ATP2A1O14983 SCARNA17.4-201ENST00000614296 143 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AL136221.1-201ENST00000621449 509 ntBASIC2.68□□□□□ -1.98
ATP2A1O14983 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ATP2A1O14983 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.67□□□□□ -1.98
ATP2A1O14983 Y_RNA.72-201ENST00000362894 103 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 RNU6-254P-201ENST00000363377 107 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 SNORA68.1-201ENST00000364537 132 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 MIR450B-201ENST00000401182 78 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.67□□□□□ -1.98
ATP2A1O14983 AC096638.1-201ENST00000444678 216 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.67□□□□□ -1.98
ATP2A1O14983 RNU6-377P-201ENST00000515965 102 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 SNORA31.6-201ENST00000516241 130 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 AP005597.4-201ENST00000526762 229 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.67□□□□□ -1.98
ATP2A1O14983 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
ATP2A1O14983 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ATP2A1O14983 DUXAP9-208ENST00000622815 614 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
ATP2A1O14983 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ATP2A1O14983 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
ATP2A1O14983 MTND5P30-201ENST00000452896 1731 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.66□□□□□ -1.98
ATP2A1O14983 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.66□□□□□ -1.98
ATP2A1O14983 RNU6-128P-201ENST00000383976 107 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 RNU6-1148P-201ENST00000410992 104 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 AL031274.1-201ENST00000450334 232 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.66□□□□□ -1.98
ATP2A1O14983 AP001324.2-201ENST00000461163 319 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.66□□□□□ -1.98
ATP2A1O14983 AC025423.5-201ENST00000550230 219 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.66□□□□□ -1.98
ATP2A1O14983 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.66□□□□□ -1.98
ATP2A1O14983 MIR7515-201ENST00000637837 67 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 AC099654.14-201ENST00000638599 341 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.66□□□□□ -1.98
ATP2A1O14983 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
ATP2A1O14983 AL109809.4-201ENST00000603520 2185 ntBASIC2.66□□□□□ -1.98
ATP2A1O14983 RBBP8P1-201ENST00000449447 1844 ntBASIC2.65□□□□□ -1.98
ATP2A1O14983 RNU6-105P-201ENST00000363909 104 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 RNU6-214P-201ENST00000384130 107 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 MT-TL1-201ENST00000386347 75 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AL079342.1-201ENST00000401460 267 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC074117.2-201ENST00000417130 397 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.65□□□□□ -1.99
ATP2A1O14983 RPL7P43-201ENST00000478876 753 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 MTCO2P30-201ENST00000503662 364 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC116353.2-201ENST00000505332 712 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 SNORA31.23-201ENST00000517219 133 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.65□□□□□ -1.99
ATP2A1O14983 AC100830.2-201ENST00000581636 240 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC021646.1-201ENST00000605469 484 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC093913.1-201ENST00000614178 329 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC009033.1-201ENST00000624279 431 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AL359854.1-201ENST00000614203 1594 ntBASIC2.65□□□□□ -1.99
ATP2A1O14983 AC010329.5-201ENST00000623497 2174 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.64□□□□□ -1.99
ATP2A1O14983 RNU6-827P-201ENST00000365553 106 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 RNU6-1329P-201ENST00000365664 107 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 RNU6-622P-201ENST00000384272 103 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 MIR504-201ENST00000385065 83 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 SNORD73A-201ENST00000386062 65 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 RNU6-876P-201ENST00000391295 104 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ATP2A1O14983 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AL445687.1-201ENST00000439946 251 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ATP2A1O14983 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.64□□□□□ -1.99
ATP2A1O14983 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.64□□□□□ -1.99
ATP2A1O14983 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.64□□□□□ -1.99
ATP2A1O14983 AC008628.2-201ENST00000502605 298 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AC025465.4-201ENST00000513422 638 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 RNU6-864P-201ENST00000516256 108 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.64□□□□□ -1.99
ATP2A1O14983 AC107953.1-201ENST00000522216 297 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 COX6CP5-201ENST00000527162 228 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AC010186.2-204ENST00000537668 439 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.64□□□□□ -1.99
ATP2A1O14983 VN1R107P-201ENST00000601784 209 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AL121917.1-203ENST00000605534 577 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.64□□□□□ -1.99
ATP2A1O14983 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms