Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MIR518D-201ENST00000385014 87 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNU6-910P-201ENST00000390844 107 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 DHFRP6-201ENST00000401776 268 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 SNORD75.1-201ENST00000408373 60 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNA5SP269-201ENST00000459032 137 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 BET1P1-201ENST00000482276 359 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 RNA5SP255-201ENST00000516370 107 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 NRON-201ENST00000517270 370 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AP003392.2-201ENST00000527269 208 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.11□□□□□ -2.39
CACNA1AO00555 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.11□□□□□ -2.39
CACNA1AO00555 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.11□□□□□ -2.39
CACNA1AO00555 AC002400.1-201ENST00000569310 726 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 MIR3664-201ENST00000579074 99 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 BNIP3P27-201ENST00000599991 412 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC091057.3-201ENST00000602684 733 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AL513534.2-201ENST00000603836 250 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC069114.2-201ENST00000604699 304 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AL022345.2-201ENST00000606307 135 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 AC011374.2-201ENST00000607135 526 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.11□□□□□ -2.39
CACNA1AO00555 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CACNA1AO00555 RNU6-543P-201ENST00000362576 108 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RNA5SP493-201ENST00000364115 91 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RNU2-28P-201ENST00000410457 189 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 TAF13P2-201ENST00000416876 286 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 SNX2P2-201ENST00000424553 323 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.1□□□□□ -2.39
CACNA1AO00555 AL135790.2-201ENST00000437701 267 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RPS15AP9-201ENST00000439856 381 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC069257.2-201ENST00000441819 155 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC092685.1-201ENST00000447960 1243 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CACNA1AO00555 AL353752.1-201ENST00000454946 260 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RPS26P45-201ENST00000471748 340 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.1□□□□□ -2.39
CACNA1AO00555 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.1□□□□□ -2.39
CACNA1AO00555 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.1□□□□□ -2.39
CACNA1AO00555 AC012213.3-201ENST00000577199 777 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 BPTFP1-201ENST00000579209 492 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 MIR3165-201ENST00000579874 75 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC090517.2-201ENST00000614966 680 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC103705.1-201ENST00000619013 241 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AP000943.4-201ENST00000622912 357 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC004009.2-201ENST00000623016 728 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 MTND4P16-201ENST00000466108 1367 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RNU6-945P-201ENST00000383947 107 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CACNA1AO00555 RNU6-1300P-201ENST00000391046 108 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CACNA1AO00555 GPM6BP2-201ENST00000432046 144 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 MTCO3P5-201ENST00000433620 714 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.1□□□□□ -2.39
CACNA1AO00555 RAB11AP1-201ENST00000442978 646 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 GPM6BP1-201ENST00000446387 144 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RAP1BP2-201ENST00000478270 544 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.1□□□□□ -2.39
CACNA1AO00555 AC010460.2-201ENST00000509054 677 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 RNU6-965P-201ENST00000516721 96 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.1□□□□□ -2.39
CACNA1AO00555 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.1□□□□□ -2.39
CACNA1AO00555 AC015688.6-201ENST00000577737 104 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 SNORA77B-201ENST00000578179 125 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 AC009950.2-201ENST00000636548 183 ntBASIC0.1□□□□□ -2.39
CACNA1AO00555 MTCO1P18-201ENST00000455518 1419 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 Y_RNA.121-201ENST00000363309 113 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 Y_RNA.256-201ENST00000364594 104 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RNU1-39P-201ENST00000383897 165 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RNU6-546P-201ENST00000383991 107 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 Y_RNA.446-201ENST00000384178 104 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RNU6-880P-201ENST00000384526 107 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RNU6-750P-201ENST00000390946 107 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RNU2-48P-201ENST00000410694 191 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RPS26P5-201ENST00000418544 335 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 PPP1R11P2-201ENST00000423543 382 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 UBE2V1P4-201ENST00000425374 344 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AC104651.1-201ENST00000427559 735 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 PTGES3P1-201ENST00000439531 483 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.09□□□□□ -2.39
CACNA1AO00555 AL096829.2-201ENST00000446582 742 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AL353691.1-201ENST00000451332 387 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AP001324.2-201ENST00000461163 319 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RPL7P43-201ENST00000478876 753 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 RNVU1-2-201ENST00000516326 135 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 IGJP1-201ENST00000522682 475 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AC124293.1-201ENST00000530034 493 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.09□□□□□ -2.39
CACNA1AO00555 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.09□□□□□ -2.39
CACNA1AO00555 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.09□□□□□ -2.39
CACNA1AO00555 MIR5093-201ENST00000583199 100 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.09□□□□□ -2.39
CACNA1AO00555 AC010900.2-201ENST00000604508 210 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 AC010133.1-201ENST00000615809 842 ntBASIC0.09□□□□□ -2.39
CACNA1AO00555 snoU2_19.1-201ENST00000362361 80 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RNU6-25P-201ENST00000383873 107 ntBASIC0.09□□□□□ -2.4
CACNA1AO00555 RNU6-29P-201ENST00000384637 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms