Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 U3.26-201ENST00000391236 204 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 AL513475.1-201ENST00000406602 315 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN3O00409 AC243964.1-201ENST00000441814 261 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN3O00409 RPS3AP12-201ENST00000443616 753 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 Y_RNA.639-201ENST00000458981 102 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 Y_RNA.653-201ENST00000459091 95 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 AP001025.1-201ENST00000486139 332 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.17□□□□□ -1.9
FOXN3O00409 IMMP1LP2-201ENST00000552954 492 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN3O00409 AC105137.2-201ENST00000569073 466 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 MIR3200-201ENST00000580767 85 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 RPS15AP11-201ENST00000594193 385 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXN3O00409 AC005046.1-201ENST00000608515 625 ntBASIC3.17□□□□□ -1.9
FOXN3O00409 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXN3O00409 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXN3O00409 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
FOXN3O00409 Y_RNA.146-201ENST00000363549 102 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 RNU6-1059P-201ENST00000363752 98 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 RNU6-1083P-201ENST00000384022 107 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 MIR491-201ENST00000384877 84 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 MIR218-1-201ENST00000384999 110 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXN3O00409 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXN3O00409 NUP35P1-201ENST00000422734 947 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXN3O00409 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXN3O00409 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.16□□□□□ -1.9
FOXN3O00409 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXN3O00409 BNIP3P16-201ENST00000589779 534 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 AC016925.2-201ENST00000605108 242 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 AL669831.3-213ENST00000636676 183 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXN3O00409 AL353743.1-202ENST00000431724 1695 ntBASIC3.16□□□□□ -1.9
FOXN3O00409 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
FOXN3O00409 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXN3O00409 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FOXN3O00409 RNU6-593P-201ENST00000364716 112 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 SNORA22B-201ENST00000383876 138 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 RNU6-310P-201ENST00000384655 107 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 MIR627-201ENST00000384979 97 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 MIR483-201ENST00000385070 76 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
FOXN3O00409 RPS29P13-201ENST00000402041 169 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 Y_RNA.646-201ENST00000410980 101 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC007969.2-201ENST00000441891 191 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 RPL39P29-201ENST00000447779 157 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 RPL7P42-201ENST00000481005 679 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AL163540.1-201ENST00000485382 386 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC090096.1-201ENST00000489168 390 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC116337.1-201ENST00000509680 687 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 SMURF2P1-201ENST00000514992 481 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 RNU5B-3P-201ENST00000516601 115 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 RN7SKP272-201ENST00000516988 232 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 Y_RNA.711-201ENST00000516993 102 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 SNORA70.24-201ENST00000517233 118 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXN3O00409 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 AP005902.1-201ENST00000521358 186 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXN3O00409 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXN3O00409 AC090897.2-201ENST00000581715 130 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 VN1R107P-201ENST00000601784 209 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC116312.1-201ENST00000606841 314 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC096772.1-201ENST00000609146 564 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXN3O00409 KPNA2P1-201ENST00000458289 1591 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AL359854.1-201ENST00000614203 1594 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 AC093908.1-201ENST00000623125 8092 ntBASIC3.15□□□□□ -1.91
FOXN3O00409 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXN3O00409 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXN3O00409 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
FOXN3O00409 AL109809.4-201ENST00000603520 2185 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 RNU1-35P-201ENST00000362782 153 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 SNORD114-19-201ENST00000363072 75 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 SNORA63C-201ENST00000364578 129 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 Y_RNA.482-201ENST00000384377 111 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXN3O00409 USP9YP30-201ENST00000430729 455 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXN3O00409 RNU7-152P-201ENST00000458982 64 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 RPS29P2-201ENST00000479278 136 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 RNU6-1045P-201ENST00000516321 107 ntBASIC3.14□□□□□ -1.91
FOXN3O00409 SNORA74D-201ENST00000516404 141 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms