Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 AC112492.4-201ENST00000456549 352 ntBASIC1.31□□□□□ -2.2
DFFAO00273 RNU6-333P-201ENST00000459117 107 ntBASIC1.31□□□□□ -2.2
DFFAO00273 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 AC022616.3-201ENST00000523940 148 ntBASIC1.31□□□□□ -2.2
DFFAO00273 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.31□□□□□ -2.2
DFFAO00273 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 TRAV32-201ENST00000553993 340 ntBASIC1.31□□□□□ -2.2
DFFAO00273 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AC008751.2-201ENST00000597885 980 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AP000240.1-201ENST00000609910 452 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AC091304.6-201ENST00000619761 202 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AC099654.13-201ENST00000639774 207 ntBASIC1.31□□□□□ -2.2
DFFAO00273 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
DFFAO00273 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.31□□□□□ -2.2
DFFAO00273 SNORD114-6-201ENST00000364393 72 ntBASIC1.3□□□□□ -2.2
DFFAO00273 SNORD32B-201ENST00000364460 84 ntBASIC1.3□□□□□ -2.2
DFFAO00273 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
DFFAO00273 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
DFFAO00273 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
DFFAO00273 RPL23AP32-201ENST00000395315 459 ntBASIC1.3□□□□□ -2.2
DFFAO00273 RNU6-607P-201ENST00000411283 108 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
DFFAO00273 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.3□□□□□ -2.2
DFFAO00273 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
DFFAO00273 MTCYBP35-201ENST00000503630 1137 ntBASIC1.3□□□□□ -2.2
DFFAO00273 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.3□□□□□ -2.2
DFFAO00273 Y_RNA.672-201ENST00000516289 104 ntBASIC1.3□□□□□ -2.2
DFFAO00273 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC115990.1-201ENST00000526957 301 ntBASIC1.3□□□□□ -2.2
DFFAO00273 ELOCP32-201ENST00000548625 324 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.3□□□□□ -2.2
DFFAO00273 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.3□□□□□ -2.2
DFFAO00273 AC112191.3-201ENST00000604371 277 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC018889.1-201ENST00000605372 397 ntBASIC1.3□□□□□ -2.2
DFFAO00273 MIR8074-201ENST00000615081 81 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC027807.2-201ENST00000616099 408 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC097372.5-201ENST00000623665 376 ntBASIC1.3□□□□□ -2.2
DFFAO00273 AC008993.2-201ENST00000631744 806 ntBASIC1.3□□□□□ -2.2
DFFAO00273 U4.7-201ENST00000638126 106 ntBASIC1.3□□□□□ -2.2
DFFAO00273 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.3□□□□□ -2.2
DFFAO00273 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
DFFAO00273 RNU6-527P-201ENST00000363425 104 ntBASIC1.29□□□□□ -2.2
DFFAO00273 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
DFFAO00273 HSFY7P-201ENST00000432672 318 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.29□□□□□ -2.2
DFFAO00273 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
DFFAO00273 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.29□□□□□ -2.2
DFFAO00273 HSFY8P-201ENST00000437934 318 ntBASIC1.29□□□□□ -2.2
DFFAO00273 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.29□□□□□ -2.2
DFFAO00273 HSFY5P-201ENST00000453726 309 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC098862.1-201ENST00000504991 413 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC104806.1-201ENST00000508720 308 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.29□□□□□ -2.2
DFFAO00273 RNU6-237P-201ENST00000515985 71 ntBASIC1.29□□□□□ -2.2
DFFAO00273 RNU6-1220P-201ENST00000517126 108 ntBASIC1.29□□□□□ -2.2
DFFAO00273 RNA5SP490-201ENST00000517141 136 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.29□□□□□ -2.2
DFFAO00273 AP003461.1-201ENST00000528866 78 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC022878.1-201ENST00000530684 149 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.29□□□□□ -2.2
DFFAO00273 SUB1P4-201ENST00000566062 339 ntBASIC1.29□□□□□ -2.2
DFFAO00273 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.29□□□□□ -2.2
DFFAO00273 AC005786.1-201ENST00000588553 154 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AL034555.1-201ENST00000604816 211 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AL121992.2-201ENST00000606262 256 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC104073.3-201ENST00000610942 955 ntBASIC1.29□□□□□ -2.2
DFFAO00273 MIR7844-201ENST00000616161 122 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
DFFAO00273 Z69720.2-201ENST00000624755 279 ntBASIC1.29□□□□□ -2.2
DFFAO00273 AC233981.2-201ENST00000611524 1614 ntBASIC1.29□□□□□ -2.2
DFFAO00273 RNU6-1285P-201ENST00000363480 105 ntBASIC1.28□□□□□ -2.2
DFFAO00273 RNU6-105P-201ENST00000363909 104 ntBASIC1.28□□□□□ -2.2
DFFAO00273 RNU5E-5P-201ENST00000365379 116 ntBASIC1.28□□□□□ -2.2
DFFAO00273 SNORA12-201ENST00000391162 147 ntBASIC1.28□□□□□ -2.2
DFFAO00273 FGF7P8-201ENST00000402994 292 ntBASIC1.28□□□□□ -2.2
DFFAO00273 CYCSP33-201ENST00000414485 327 ntBASIC1.28□□□□□ -2.2
DFFAO00273 MTATP6P16-201ENST00000434543 526 ntBASIC1.28□□□□□ -2.2
DFFAO00273 MTND2P4-201ENST00000445034 1004 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.28□□□□□ -2.2
DFFAO00273 USP9YP12-201ENST00000450481 570 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AC130509.1-201ENST00000464158 433 ntBASIC1.28□□□□□ -2.2
DFFAO00273 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
DFFAO00273 MTND2P14-201ENST00000482139 351 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AC025465.3-201ENST00000510570 311 ntBASIC1.28□□□□□ -2.2
DFFAO00273 MIR449C-201ENST00000516047 92 ntBASIC1.28□□□□□ -2.2
DFFAO00273 SCARNA24.1-201ENST00000516465 137 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.28□□□□□ -2.2
DFFAO00273 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
DFFAO00273 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.28□□□□□ -2.2
DFFAO00273 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.28□□□□□ -2.2
DFFAO00273 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.28□□□□□ -2.2
DFFAO00273 AC138649.3-201ENST00000622154 254 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms