Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 IGKV2-26-201ENST00000518305 343 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.51□□□□□ -1.85
CBX4O00257 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.51□□□□□ -1.85
CBX4O00257 AC040926.1-201ENST00000530195 238 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.51□□□□□ -1.85
CBX4O00257 RPS15AP11-201ENST00000594193 385 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AC006557.5-201ENST00000603126 811 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AL359198.2-201ENST00000611836 194 ntBASIC3.51□□□□□ -1.85
CBX4O00257 RMST_6.1-201ENST00000611980 203 ntBASIC3.51□□□□□ -1.85
CBX4O00257 AC091903.1-201ENST00000624322 454 ntBASIC3.51□□□□□ -1.85
CBX4O00257 SNORA43.4-201ENST00000629559 138 ntBASIC3.51□□□□□ -1.85
CBX4O00257 U6.98-201ENST00000637157 84 ntBASIC3.51□□□□□ -1.85
CBX4O00257 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CBX4O00257 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CBX4O00257 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.5□□□□□ -1.85
CBX4O00257 AP000560.1-201ENST00000624150 1937 ntBASIC3.5□□□□□ -1.85
CBX4O00257 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
CBX4O00257 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
CBX4O00257 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CBX4O00257 MFSD8-233ENST00000641482 4860 ntBASIC3.5□□□□□ -1.85
CBX4O00257 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.5□□□□□ -1.85
CBX4O00257 AC091152.2-201ENST00000591628 2569 ntBASIC3.5□□□□□ -1.85
CBX4O00257 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
CBX4O00257 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CBX4O00257 RNU6-874P-201ENST00000362390 105 ntBASIC3.5□□□□□ -1.85
CBX4O00257 SNORD115-32-201ENST00000364079 82 ntBASIC3.5□□□□□ -1.85
CBX4O00257 EI24P2-201ENST00000397776 1076 ntBASIC3.5□□□□□ -1.85
CBX4O00257 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.5□□□□□ -1.85
CBX4O00257 AL159169.1-201ENST00000421119 127 ntBASIC3.5□□□□□ -1.85
CBX4O00257 Z82188.1-201ENST00000436709 154 ntBASIC3.5□□□□□ -1.85
CBX4O00257 TOMM22P6-201ENST00000465035 409 ntBASIC3.5□□□□□ -1.85
CBX4O00257 MTATP8P1-201ENST00000467115 207 ntBASIC3.5□□□□□ -1.85
CBX4O00257 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.5□□□□□ -1.85
CBX4O00257 RPL22P13-201ENST00000493291 347 ntBASIC3.5□□□□□ -1.85
CBX4O00257 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.5□□□□□ -1.85
CBX4O00257 FCF1P8-201ENST00000510322 597 ntBASIC3.5□□□□□ -1.85
CBX4O00257 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.5□□□□□ -1.85
CBX4O00257 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.5□□□□□ -1.85
CBX4O00257 AC008269.2-201ENST00000561915 1105 ntBASIC3.5□□□□□ -1.85
CBX4O00257 MIR5571-201ENST00000577998 113 ntBASIC3.5□□□□□ -1.85
CBX4O00257 MIR4738-201ENST00000579134 87 ntBASIC3.5□□□□□ -1.85
CBX4O00257 RPS29P30-201ENST00000600975 111 ntBASIC3.5□□□□□ -1.85
CBX4O00257 XIST_intron.1-201ENST00000619444 68 ntBASIC3.5□□□□□ -1.85
CBX4O00257 AC022149.2-201ENST00000621061 203 ntBASIC3.5□□□□□ -1.85
CBX4O00257 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.5□□□□□ -1.85
CBX4O00257 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.5□□□□□ -1.85
CBX4O00257 ZNF826P-207ENST00000622273 1910 ntBASIC3.5□□□□□ -1.85
CBX4O00257 AL049781.1-201ENST00000623195 3585 ntBASIC3.5□□□□□ -1.85
CBX4O00257 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.49□□□□□ -1.85
CBX4O00257 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CBX4O00257 Y_RNA.149-201ENST00000363558 117 ntBASIC3.49□□□□□ -1.85
CBX4O00257 U3.13-201ENST00000364804 214 ntBASIC3.49□□□□□ -1.85
CBX4O00257 Y_RNA.358-201ENST00000365491 99 ntBASIC3.49□□□□□ -1.85
CBX4O00257 MIR32-201ENST00000384965 70 ntBASIC3.49□□□□□ -1.85
CBX4O00257 MIR153-2-201ENST00000385225 87 ntBASIC3.49□□□□□ -1.85
CBX4O00257 RNU1-101P-201ENST00000391171 127 ntBASIC3.49□□□□□ -1.85
CBX4O00257 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CBX4O00257 AL133475.1-201ENST00000404414 305 ntBASIC3.49□□□□□ -1.85
CBX4O00257 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.49□□□□□ -1.85
CBX4O00257 RNU7-170P-201ENST00000459303 61 ntBASIC3.49□□□□□ -1.85
CBX4O00257 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.49□□□□□ -1.85
CBX4O00257 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.49□□□□□ -1.85
CBX4O00257 SNORA70.19-201ENST00000516717 90 ntBASIC3.49□□□□□ -1.85
CBX4O00257 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.49□□□□□ -1.85
CBX4O00257 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.49□□□□□ -1.85
CBX4O00257 AC010928.2-201ENST00000588017 287 ntBASIC3.49□□□□□ -1.85
CBX4O00257 AC012493.2-201ENST00000595083 291 ntBASIC3.49□□□□□ -1.85
CBX4O00257 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.49□□□□□ -1.85
CBX4O00257 AL355297.3-201ENST00000604082 446 ntBASIC3.49□□□□□ -1.85
CBX4O00257 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.49□□□□□ -1.85
CBX4O00257 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.49□□□□□ -1.85
CBX4O00257 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CBX4O00257 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CBX4O00257 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CBX4O00257 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CBX4O00257 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CBX4O00257 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.48□□□□□ -1.85
CBX4O00257 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.48□□□□□ -1.85
CBX4O00257 RNU6-212P-201ENST00000362642 104 ntBASIC3.48□□□□□ -1.85
CBX4O00257 SNORD114-19-201ENST00000363072 75 ntBASIC3.48□□□□□ -1.85
CBX4O00257 Y_RNA.106-201ENST00000363189 100 ntBASIC3.48□□□□□ -1.85
CBX4O00257 RNA5SP197-201ENST00000363357 119 ntBASIC3.48□□□□□ -1.85
CBX4O00257 RNU6-1285P-201ENST00000363480 105 ntBASIC3.48□□□□□ -1.85
CBX4O00257 Y_RNA.153-201ENST00000363615 91 ntBASIC3.48□□□□□ -1.85
CBX4O00257 Y_RNA.176-201ENST00000363815 109 ntBASIC3.48□□□□□ -1.85
CBX4O00257 SNORA38.1-201ENST00000364172 131 ntBASIC3.48□□□□□ -1.85
CBX4O00257 RNU4-50P-201ENST00000364361 141 ntBASIC3.48□□□□□ -1.85
CBX4O00257 SNORA63.7-201ENST00000365579 123 ntBASIC3.48□□□□□ -1.85
CBX4O00257 SNORA51.11-201ENST00000384442 131 ntBASIC3.48□□□□□ -1.85
CBX4O00257 MIR548F4-201ENST00000408515 105 ntBASIC3.48□□□□□ -1.85
CBX4O00257 HMGB3P2-201ENST00000411913 584 ntBASIC3.48□□□□□ -1.85
CBX4O00257 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.48□□□□□ -1.85
CBX4O00257 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.48□□□□□ -1.85
CBX4O00257 AC004383.1-201ENST00000438135 289 ntBASIC3.48□□□□□ -1.85
CBX4O00257 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.48□□□□□ -1.85
CBX4O00257 RPS29P31-201ENST00000446147 164 ntBASIC3.48□□□□□ -1.85
CBX4O00257 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.48□□□□□ -1.85
CBX4O00257 AF186996.7-201ENST00000492781 209 ntBASIC3.48□□□□□ -1.85
CBX4O00257 RPS27P26-201ENST00000494583 239 ntBASIC3.48□□□□□ -1.85
CBX4O00257 RPL7P47-201ENST00000497299 556 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms