Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 Y_RNA.715-201ENST00000517082 110 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 RNU6-794P-201ENST00000517261 64 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC040926.1-201ENST00000530195 238 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC104581.2-201ENST00000572227 430 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AL121655.1-201ENST00000605811 308 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 MIR6134-201ENST00000617606 109 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC138627.2-201ENST00000624202 601 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC78A2IDD5 AC017071.1-201ENST00000564407 2204 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 CDC27P3-201ENST00000635418 1910 ntBASIC3.31□□□□□ -1.88
CCDC78A2IDD5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 SNORD50.1-201ENST00000362987 71 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 Y_RNA.106-201ENST00000363189 100 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 RNU6-105P-201ENST00000363909 104 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 RNU6-336P-201ENST00000364891 107 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 SNORA69.1-201ENST00000390904 137 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 BTF3L4P2-201ENST00000392798 346 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 RNU6-847P-201ENST00000411115 108 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AL714022.1-201ENST00000439897 151 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 OSTCP8-201ENST00000445117 448 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC079354.2-201ENST00000453523 154 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 RPL22P13-201ENST00000493291 347 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 SNORA31.18-201ENST00000517043 134 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 MIR2355-201ENST00000517199 87 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AL590705.4-201ENST00000532209 134 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AL391261.3-201ENST00000557194 520 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC110588.1-201ENST00000559699 137 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 MTND4LP5-201ENST00000605152 292 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.3□□□□□ -1.88
CCDC78A2IDD5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC78A2IDD5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 Y_RNA.48-201ENST00000362710 103 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 RNU6-428P-201ENST00000362942 107 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 Z98749.2-208ENST00000381646 500 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AL353705.1-201ENST00000433468 480 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 FCF1P4-201ENST00000448326 183 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AC115115.1-201ENST00000449927 248 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 MTCO3P8-201ENST00000453691 755 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 SNORA43.2-201ENST00000516652 128 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 MYL12BP1-201ENST00000569826 507 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AC006600.1-201ENST00000572529 153 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 U2.1-201ENST00000618978 145 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 MTND5P7-201ENST00000413558 1798 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AC010680.1-201ENST00000590024 3590 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
CCDC78A2IDD5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 Y_RNA.485-201ENST00000384395 102 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 RNU6-658P-201ENST00000384606 106 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 EIF1AXP1-201ENST00000419267 435 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 MTND3P9-201ENST00000429526 346 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AC098831.1-201ENST00000440661 216 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AL513124.1-201ENST00000450410 614 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 RPL26P9-201ENST00000457466 433 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 RN7SKP57-201ENST00000517248 293 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AC131281.1-201ENST00000522984 164 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AC016256.1-201ENST00000547971 354 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 CR383656.8-201ENST00000549046 145 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 RPS29P30-201ENST00000600975 111 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 U6.104-201ENST00000637979 90 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms