Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MIR7975-201ENST00000619350 68 ntBASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL159153.1-201ENST00000619688 317 ntBASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL109809.4-201ENST00000603520 2185 ntBASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 ZNF826P-207ENST00000622273 1910 ntBASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL353743.1-202ENST00000431724 1695 ntBASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC073073.2-201ENST00000609827 2578 ntBASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.5□□□□□ -2.01
IGHV4-28A0A0C4DH34 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 MFSD8-233ENST00000641482 4860 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 MIR208A-201ENST00000362287 71 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 Y_RNA.106-201ENST00000363189 100 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 Y_RNA.358-201ENST00000365491 99 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 Y_RNA.389-201ENST00000383924 113 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 MIR628-201ENST00000385229 95 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 Y_RNA.592-201ENST00000410274 109 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL358075.3-201ENST00000426289 226 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 RPL22P13-201ENST00000493291 347 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU6-475P-201ENST00000516073 104 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC008739.2-201ENST00000597006 317 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC073410.2-201ENST00000603240 332 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL078605.1-201ENST00000603529 500 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL138825.1-201ENST00000618587 192 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 U2.1-201ENST00000618978 145 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 SNORD98-201ENST00000636377 67 ntBASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
IGHV4-28A0A0C4DH34 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AP000560.1-201ENST00000624150 1937 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU6-222P-201ENST00000362438 107 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNA5SP387-201ENST00000364226 106 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU1-33P-201ENST00000364249 162 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 SNORA70.4-201ENST00000365509 134 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 Y_RNA.424-201ENST00000384063 103 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 Y_RNA.455-201ENST00000384230 98 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU6-17P-201ENST00000384245 107 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU6-18P-201ENST00000384527 107 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNVU1-14-201ENST00000384770 164 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 MIR186-201ENST00000384988 86 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 MIR487A-201ENST00000385009 80 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 SNORA26.3-201ENST00000391119 136 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 SAR1AP2-201ENST00000392696 594 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL356057.3-201ENST00000402607 340 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 CYCSP48-201ENST00000417124 323 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AP000907.1-201ENST00000428428 510 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 MTND5P22-201ENST00000458380 195 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 snoU13.22-201ENST00000459428 104 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC006445.1-201ENST00000491925 405 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RPL7P47-201ENST00000497299 556 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AIG1P1-201ENST00000503376 148 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 FCF1P8-201ENST00000510322 597 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU6-1231P-201ENST00000517185 103 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 VN1R91P-201ENST00000594377 169 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 Z98751.3-201ENST00000604447 521 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 RMST_6.1-201ENST00000611980 203 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 AL049781.1-201ENST00000623195 3585 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 PWAR6-201ENST00000552334 4618 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 MTND5P27-201ENST00000428871 1720 ntBASIC2.48□□□□□ -2.01
IGHV4-28A0A0C4DH34 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC068647.1-201ENST00000489539 2265 ntBASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 SNORD115-32-201ENST00000364079 82 ntBASIC2.47□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU1-57P-201ENST00000384491 166 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms