Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 MTCO3P38-201ENST00000468910 766 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC083798.1-201ENST00000472671 131 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RPL36AP48-201ENST00000485521 314 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC140059.1-201ENST00000489238 361 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RPL39P5-202ENST00000512505 151 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC104136.1-201ENST00000512969 394 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-314P-201ENST00000516574 104 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.693-201ENST00000516641 110 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 SCARNA3-201ENST00000517097 143 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AP001893.2-201ENST00000526949 202 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC010186.2-204ENST00000537668 439 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AL512360.1-201ENST00000555346 234 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC004223.2-201ENST00000590309 544 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 BNIP3P10-201ENST00000605360 577 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC015540.1-201ENST00000615828 501 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC009233.1-201ENST00000616477 371 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 uc_338.34-201ENST00000617467 174 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC026585.1-201ENST00000619582 524 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC022418.1-201ENST00000624118 445 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 Z69720.2-201ENST00000624755 279 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC005609.4-201ENST00000625071 447 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.53□□□□□ -2.17
TRAV40A0A0B4J280 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.53□□□□□ -2.17
TRAV40A0A0B4J280 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AL359854.1-201ENST00000614203 1594 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-1042P-201ENST00000384204 107 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-748P-201ENST00000384648 107 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RNA5SP219-201ENST00000390940 113 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 MIR548F1-201ENST00000408667 84 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 SNORD56-201ENST00000413522 71 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AC074117.2-201ENST00000417130 397 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 MTND1P1-201ENST00000445453 368 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RPL30P12-201ENST00000474666 353 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RN7SL274P-201ENST00000492268 272 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 MTCYBP40-201ENST00000509390 1135 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RNA5SP458-201ENST00000516188 119 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-720P-201ENST00000516363 108 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-506P-201ENST00000516553 94 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AL137161.1-201ENST00000532231 390 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 OR11H5P-201ENST00000554039 926 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RPS3AP23-202ENST00000574601 686 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 RPS15AP11-201ENST00000594193 385 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 AC021646.1-201ENST00000605469 484 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 DUXAP9-208ENST00000622815 614 ntBASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
TRAV40A0A0B4J280 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-623P-201ENST00000363143 105 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-1085P-201ENST00000363576 107 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-622P-201ENST00000384272 103 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-843P-201ENST00000384454 104 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-692P-201ENST00000384496 107 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AL606923.1-201ENST00000406616 190 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU6-908P-201ENST00000410160 94 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU2-40P-201ENST00000410833 196 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 CYCSP49-201ENST00000420810 319 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC097463.2-201ENST00000421074 142 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 MTND3P16-201ENST00000452205 344 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 HMGB1P30-201ENST00000492455 606 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC026801.1-201ENST00000497178 464 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 RNU5B-3P-201ENST00000516601 115 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AP004607.1-201ENST00000524456 203 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 OR5AQ1P-201ENST00000527596 927 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC079598.5-201ENST00000547460 117 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 CR383656.8-201ENST00000549046 145 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC090115.3-201ENST00000553218 849 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 MTCO3P23-201ENST00000561363 289 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 TPRKBP2-201ENST00000565969 475 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC012557.2-201ENST00000605919 418 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AL121757.2-201ENST00000611223 313 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC024581.2-201ENST00000619986 252 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 AC084768.2-201ENST00000622736 221 ntBASIC1.51□□□□□ -2.17
TRAV40A0A0B4J280 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms