Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC026414.1-201ENST00000504046 698 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC074344.1-201ENST00000512823 224 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC091163.3-201ENST00000518269 1144 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC025678.1-201ENST00000567861 338 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 MTCYBP33-201ENST00000575007 1130 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AC022432.1-201ENST00000595739 310 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 ZNF92P2-201ENST00000600543 1059 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 BNIP3P31-201ENST00000604515 566 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 AL356094.1-201ENST00000624663 1212 ntBASIC0.4□□□□□ -2.35
TRAV17A0A0B4J275 snoU2_19.1-201ENST00000362361 80 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 SNORD114-24-201ENST00000365029 72 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-883P-201ENST00000384597 107 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 Y_RNA.534-201ENST00000384599 112 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-1176P-201ENST00000390955 107 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC068533.2-201ENST00000411872 306 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 MTCO3P43-201ENST00000440974 771 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AL157398.1-201ENST00000452981 186 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 SNORD124-201ENST00000459577 104 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 PDCD5P2-201ENST00000507570 312 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-1102P-201ENST00000516149 96 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP481-201ENST00000516814 122 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC008751.2-201ENST00000597885 980 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AL031775.1-201ENST00000607014 887 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC068647.2-201ENST00000637380 353 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 AC010615.1-201ENST00000594254 1764 ntBASIC0.39□□□□□ -2.35
TRAV17A0A0B4J275 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AL079343.1-201ENST00000572358 1771 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 MTND4P21-201ENST00000453886 1357 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-858P-201ENST00000362436 107 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 MIR605-201ENST00000385078 83 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP390-201ENST00000410191 113 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP511-201ENST00000410487 115 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 DEFB130D-201ENST00000426866 237 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AC003071.1-201ENST00000451219 789 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AC104563.1-201ENST00000476147 376 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 COX6CP6-201ENST00000490840 228 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 RNU5A-4P-201ENST00000516588 111 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP168-201ENST00000516642 112 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 SNORA70.22-201ENST00000517160 124 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AP003355.1-201ENST00000518956 587 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 BNIP3P16-201ENST00000589779 534 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 VN1R82P-201ENST00000601481 356 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 BNIP3P9-201ENST00000603714 553 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AC090578.1-201ENST00000604955 591 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 AP000676.3-201ENST00000623299 569 ntBASIC0.38□□□□□ -2.35
TRAV17A0A0B4J275 MIR330-201ENST00000362196 94 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 MIR19A-201ENST00000384878 82 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 MIR625-201ENST00000385047 85 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-817P-201ENST00000391083 104 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AL357139.1-201ENST00000407792 426 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 RPS26P5-201ENST00000418544 335 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AL591704.1-201ENST00000432574 275 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AC079776.3-201ENST00000450665 370 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 HMGB1P33-201ENST00000563485 527 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AP000654.2-201ENST00000605633 586 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 AC063943.3-201ENST00000615562 356 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.37□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-1284P-201ENST00000363701 100 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-744P-201ENST00000365557 107 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-650P-201ENST00000365658 111 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 RNU6-1316P-201ENST00000384242 108 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 RNU2-42P-201ENST00000410697 113 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC123900.1-201ENST00000420390 96 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 HMGB1P30-201ENST00000492455 606 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC010468.3-201ENST00000508225 458 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC079140.3-201ENST00000511111 550 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AL590229.1-201ENST00000603497 542 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC091925.1-201ENST00000623204 462 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 AC068787.1-201ENST00000623908 691 ntBASIC0.36□□□□□ -2.35
TRAV17A0A0B4J275 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 MIR16-2-201ENST00000362117 81 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 SNORD32B-201ENST00000364460 84 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 SNORA75B-201ENST00000384053 137 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 MIR301A-201ENST00000385261 86 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 SNORD12-201ENST00000391002 90 ntBASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV17A0A0B4J275 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms