Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV4A0A0B4J268 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 MIR340-201ENST00000362125 95 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 RNU5E-6P-201ENST00000365574 115 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-331P-201ENST00000384724 107 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 MTND4P20-201ENST00000424125 869 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC244505.5-201ENST00000443639 207 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 RPS4XP11-201ENST00000446897 772 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 ATP5J2P3-201ENST00000451550 258 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 TOMM22P6-201ENST00000465035 409 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 RPS26P45-201ENST00000471748 340 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC108078.2-201ENST00000510750 236 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC079395.1-201ENST00000510981 262 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC109445.1-201ENST00000512356 383 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 PSMC1P5-201ENST00000512850 177 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 TRMT112P2-201ENST00000512910 132 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC112206.3-201ENST00000514578 389 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-237P-201ENST00000515985 71 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 SNORA31.16-201ENST00000516773 139 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AP003049.1-201ENST00000529418 457 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC009712.1-201ENST00000564938 316 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AP001004.1-201ENST00000582468 324 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 BNIP3P8-201ENST00000597863 560 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC107304.1-201ENST00000604229 296 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 AC083806.3-201ENST00000614016 455 ntBASIC0.61□□□□□ -2.31
TRAV4A0A0B4J268 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-960P-201ENST00000364056 120 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 RNY3P13-201ENST00000365542 102 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC006461.1-201ENST00000412637 326 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 MTCO3P29-201ENST00000432119 779 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 RPS25P9-201ENST00000435591 252 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC069257.2-201ENST00000441819 155 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC145146.1-201ENST00000496370 254 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC103851.1-201ENST00000506833 274 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-351P-201ENST00000516097 100 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 SNORA70.22-201ENST00000517160 124 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC008088.1-201ENST00000580993 280 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 FAM71BP1-201ENST00000604431 523 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-88P-201ENST00000606801 100 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 MIR3976-201ENST00000606807 139 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC131235.4-201ENST00000609288 620 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC040896.1-201ENST00000613819 479 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC091948.2-201ENST00000636510 279 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 AC068647.2-201ENST00000637380 353 ntBASIC0.6□□□□□ -2.31
TRAV4A0A0B4J268 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-862P-201ENST00000362804 105 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 SNORA4.1-201ENST00000364263 144 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 MIR19B1-201ENST00000384829 87 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 SNORA12-201ENST00000391162 147 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 RNU11-5P-201ENST00000391216 129 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AP000275.1-201ENST00000411943 390 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 ARL5AP1-201ENST00000418991 388 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AC010099.3-201ENST00000423896 409 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 RPL23AP30-201ENST00000432419 501 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 HMGN1P7-201ENST00000491722 313 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 ARL2BPP4-201ENST00000506854 471 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 CBX3P8-201ENST00000532412 525 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AC024060.1-201ENST00000607052 494 ntBASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV4A0A0B4J268 AL159152.1-201ENST00000635019 2587 ntBASIC0.59□□□□□ -2.32
TRAV4A0A0B4J268 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
TRAV4A0A0B4J268 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 RNU4-15P-201ENST00000362613 141 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 RNY1P10-201ENST00000363268 113 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 RNU6-321P-201ENST00000410912 106 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 COX6CP10-201ENST00000416832 224 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC007969.2-201ENST00000441891 191 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC005840.1-201ENST00000498412 377 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC022447.4-201ENST00000504053 364 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AP005136.1-201ENST00000579765 429 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 MIR3146-201ENST00000580367 79 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 VN1R107P-201ENST00000601784 209 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AL451064.1-201ENST00000607718 471 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC106800.4-201ENST00000614905 153 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AL359547.2-201ENST00000615810 418 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AL512427.1-201ENST00000618593 349 ntBASIC0.58□□□□□ -2.32
TRAV4A0A0B4J268 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms