Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-1123P-201ENST00000362347 106 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-212P-201ENST00000362642 104 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 SNORA4.2-201ENST00000365313 147 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 SNORD114-22-201ENST00000365423 72 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 ARL5AP1-201ENST00000418991 388 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 ELOCP30-201ENST00000447108 299 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 MTND1P31-201ENST00000449206 961 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AC012308.1-201ENST00000451232 178 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 ATP5J2P3-201ENST00000451550 258 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 TPRKBP1-201ENST00000456243 481 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AC105758.1-201ENST00000506038 399 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AC005741.1-201ENST00000511094 432 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR449C-201ENST00000516047 92 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 HIGD1AP17-201ENST00000554576 276 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR5000-201ENST00000577717 103 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR4742-201ENST00000581069 85 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AC016727.2-201ENST00000603988 621 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AC092106.3-201ENST00000611308 722 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 AL157770.1-201ENST00000623049 439 ntBASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.1□□□□□ -2.39
TRAV1-2A0A0B4J238 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
TRAV1-2A0A0B4J238 U3.9-201ENST00000363823 204 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 RNU6-1335P-201ENST00000365426 107 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 RNU6-16P-201ENST00000384385 107 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 SNORA80D-201ENST00000384488 135 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 COX6CP10-201ENST00000416832 224 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 ELOCP9-201ENST00000418624 239 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 RPS3AP37-201ENST00000419176 745 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 MTCYBP5-201ENST00000423752 1135 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AL591704.1-201ENST00000432574 275 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC005094.1-201ENST00000440420 368 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 MTCO3P43-201ENST00000440974 771 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC003071.1-201ENST00000451219 789 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC104982.1-201ENST00000478775 574 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 SNORA68.3-201ENST00000515906 83 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC092325.1-201ENST00000566449 554 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 KC877982.1-201ENST00000602313 470 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR6513-201ENST00000621188 64 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC007792.1-201ENST00000623023 402 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AC005858.4-201ENST00000623191 700 ntBASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV1-2A0A0B4J238 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 Y_RNA.191-201ENST00000363972 113 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 Y_RNA.534-201ENST00000384599 112 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR301A-201ENST00000385261 86 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR1276-201ENST00000408707 83 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR548J-201ENST00000408833 112 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AL158050.1-201ENST00000416077 457 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MTCO1P21-201ENST00000416634 589 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AC013262.1-201ENST00000426710 252 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 ISCA1P6-201ENST00000427740 390 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AC069257.2-201ENST00000441819 155 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AC024589.1-201ENST00000512207 263 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 SUMO2P16-201ENST00000519475 264 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AC023050.2-201ENST00000544968 387 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR4709-201ENST00000577272 72 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR4711-201ENST00000578274 70 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR151B-201ENST00000584249 96 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR4293-201ENST00000584305 78 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 AC090330.1-201ENST00000588646 764 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIR6788-201ENST00000618842 66 ntBASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV1-2A0A0B4J238 MIRLET7D-201ENST00000362263 87 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 SNORA4.3-201ENST00000365564 137 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 RNU6-1025P-201ENST00000410629 104 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 RPL23AP95-201ENST00000426806 265 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 SEPT7P5-201ENST00000434048 306 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 MTND5P14-201ENST00000441481 1267 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 SNRPEP8-201ENST00000442866 260 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC233266.1-201ENST00000454518 96 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 HMGB1P28-201ENST00000507778 552 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 ATP5EP1-201ENST00000510257 156 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 MTCO3P28-201ENST00000513351 515 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 RNU6-583P-201ENST00000516012 92 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC068620.3-201ENST00000602749 560 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 Z83818.1-201ENST00000603584 150 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC012557.2-201ENST00000605919 418 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AL450270.1-201ENST00000606160 391 ntBASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV1-2A0A0B4J238 AC242852.1-201ENST00000612151 96 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms