Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 SNORD32B-201ENST00000364460 84 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 MTND5P14-201ENST00000441481 1267 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 NFU1P2-201ENST00000448700 469 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 AL049830.1-201ENST00000468034 425 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 RPF2P2-201ENST00000504693 896 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 MTND2P33-201ENST00000506452 1031 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 AC243773.3-201ENST00000613270 256 ntBASIC-0.09□□□□□ -2.42
LINC01558Q9Y6Z2 U3.9-201ENST00000363823 204 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 RNU6-534P-201ENST00000364877 106 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 RNY1P8-201ENST00000383970 114 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 SNORD116-13-201ENST00000384408 92 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 MIR937-201ENST00000401271 86 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 RNU6-321P-201ENST00000410912 106 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 RNA5SP222-201ENST00000411039 105 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 MTCO2P1-201ENST00000424648 477 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 VN1R42P-201ENST00000424651 344 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 AC244098.3-201ENST00000424803 96 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 AL353718.1-201ENST00000451028 517 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 U7.7-201ENST00000459276 60 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 RPL39P36-201ENST00000490784 156 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 CYP3A137P-201ENST00000562436 69 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 AL355816.2-201ENST00000610049 647 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 AL138726.1-201ENST00000614873 333 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 7SK.10-201ENST00000621414 298 ntBASIC-0.1□□□□□ -2.43
LINC01558Q9Y6Z2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 MIR103A1-201ENST00000362165 78 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 RNU6-438P-201ENST00000365561 103 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 SNORD116-20-201ENST00000384529 92 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 SNORA75.2-201ENST00000391138 150 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 SNORA75.3-201ENST00000391231 150 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC068533.2-201ENST00000411872 306 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 ELOCP30-201ENST00000447108 299 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 OR6C7P-201ENST00000547875 934 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AL136520.1-202ENST00000555494 763 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC090888.2-201ENST00000559765 1144 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC027807.1-201ENST00000559921 996 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC092325.1-201ENST00000566449 554 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC011195.1-201ENST00000578177 177 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AC097065.2-201ENST00000608159 533 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 AL512643.1-201ENST00000635735 524 ntBASIC-0.11□□□□□ -2.43
LINC01558Q9Y6Z2 MIR411-201ENST00000362239 96 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 SNORD114-27-201ENST00000363766 70 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 MIR301A-201ENST00000385261 86 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 MIR140-201ENST00000385282 100 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 RNA5SP219-201ENST00000390940 113 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 SNORA12-201ENST00000391162 147 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 CALM2P3-201ENST00000400429 449 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 SNORA11.2-201ENST00000408318 127 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 MTND5P2-201ENST00000442927 1142 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 H2AFZP6-201ENST00000444403 394 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AC003071.1-201ENST00000451219 789 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 TOMM22P6-201ENST00000465035 409 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AC027338.1-201ENST00000514840 825 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AL133153.1-201ENST00000557756 303 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 MIR4714-201ENST00000580728 77 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AC007363.1-201ENST00000604736 620 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AC243829.3-201ENST00000622177 108 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 AC120349.2-201ENST00000625002 298 ntBASIC-0.12□□□□□ -2.43
LINC01558Q9Y6Z2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
LINC01558Q9Y6Z2 RNU1-17P-201ENST00000363022 152 ntBASIC-0.13□□□□□ -2.43
LINC01558Q9Y6Z2 SNORD46.1-201ENST00000364139 104 ntBASIC-0.13□□□□□ -2.43
LINC01558Q9Y6Z2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
LINC01558Q9Y6Z2 RNU6-505P-201ENST00000384427 107 ntBASIC-0.13□□□□□ -2.43
LINC01558Q9Y6Z2 RNU6-952P-201ENST00000391164 108 ntBASIC-0.13□□□□□ -2.43
LINC01558Q9Y6Z2 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms