Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GTF3C3Q9Y5Q9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GTF3C3Q9Y5Q9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GTF3C3Q9Y5Q9 BX322639.1-202ENST00000423987 2213 ntBASIC4.88□□□□□ -1.63
GTF3C3Q9Y5Q9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 Y_RNA.126-201ENST00000363382 111 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 Y_RNA.145-201ENST00000363527 102 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 U3.19-201ENST00000390893 196 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 MIR1178-201ENST00000408396 91 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 RN7SKP220-201ENST00000410611 288 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 BX510359.3-201ENST00000422168 306 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AC112492.4-201ENST00000456549 352 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AC021205.2-201ENST00000480069 347 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AC099522.1-202ENST00000514718 367 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU6-327P-201ENST00000516270 127 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU6-586P-201ENST00000517265 104 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 RNA5SP179-201ENST00000517284 121 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 MIR5188-201ENST00000583467 113 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 SNORD58B-201ENST00000607313 66 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 MTND4P1-201ENST00000457501 1466 ntBASIC4.87□□□□□ -1.63
GTF3C3Q9Y5Q9 AC091812.1-201ENST00000432235 1948 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 RNY3P11-201ENST00000364153 102 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 Y_RNA.389-201ENST00000383924 113 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU6-245P-201ENST00000384020 107 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU6-738P-201ENST00000384531 106 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AL356387.2-201ENST00000422272 243 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 EEF1B2P7-201ENST00000451177 676 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AC074250.1-201ENST00000511117 192 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU6-1045P-201ENST00000516321 107 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 HSPE1P18-201ENST00000517602 280 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 MIR3138-201ENST00000585238 82 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AL162373.1-201ENST00000620433 407 ntBASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
GTF3C3Q9Y5Q9 MIR627-201ENST00000384979 97 ntBASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 WARS2P1-201ENST00000429678 537 ntBASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 MTCO3P8-201ENST00000453691 755 ntBASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 RAB9BP1-201ENST00000519581 626 ntBASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
GTF3C3Q9Y5Q9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 RNA5SP305-201ENST00000362665 119 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 RNA5SP507-201ENST00000363603 121 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 Y_RNA.485-201ENST00000384395 102 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU6-985P-201ENST00000410182 104 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 RNU2-63P-201ENST00000410792 194 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 CBX3P6-201ENST00000430257 527 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 RPL21P2-201ENST00000440049 481 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AC091179.1-201ENST00000461606 579 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AC022868.1-201ENST00000517767 391 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AC007458.1-201ENST00000542812 373 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AL442163.3-201ENST00000554110 156 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 MIR3117-201ENST00000584034 78 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 AL360085.1-201ENST00000604713 532 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 SNORA62.6-201ENST00000606322 83 ntBASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GTF3C3Q9Y5Q9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.84□□□□□ -1.64
GTF3C3Q9Y5Q9 SNORA46.1-201ENST00000391069 153 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL21P75-201ENST00000396599 483 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL21P28-201ENST00000401418 483 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 EIF1P2-201ENST00000428233 350 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC104332.2-201ENST00000429959 156 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC011998.1-201ENST00000433403 117 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 Z96811.1-201ENST00000445880 108 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL21P11-201ENST00000461458 483 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC010326.1-201ENST00000462726 602 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL21P39-201ENST00000463605 483 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC087190.1-201ENST00000484462 480 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC107032.1-201ENST00000485945 480 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC132942.1-201ENST00000486753 483 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 RN7SL283P-201ENST00000489055 303 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC093591.1-201ENST00000491435 481 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL21P16-201ENST00000495531 483 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AC026333.2-201ENST00000542164 106 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms