Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
YIPF1Q9Y548 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.58□□□□□ -2
YIPF1Q9Y548 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
YIPF1Q9Y548 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.57□□□□□ -2
YIPF1Q9Y548 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AL513477.1-202ENST00000417061 214 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 RPL21P2-201ENST00000440049 481 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 MTND4LP16-201ENST00000440828 295 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 PPP1R2P5-201ENST00000457256 603 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AC006026.2-201ENST00000457376 180 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 MED28P2-201ENST00000475771 317 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 TRBVA-201ENST00000498804 316 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.57□□□□□ -2
YIPF1Q9Y548 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 RNU7-30P-201ENST00000516835 62 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.57□□□□□ -2
YIPF1Q9Y548 AP000889.2-201ENST00000532684 490 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 HSPE1P20-201ENST00000538133 289 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AC026371.1-201ENST00000551867 419 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 MTCO3P13-201ENST00000577757 781 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 MIR3124-201ENST00000582636 67 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AL121917.1-203ENST00000605534 577 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 SCARNA17.4-201ENST00000614296 143 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AL138726.1-201ENST00000614873 333 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 AC097372.5-201ENST00000623665 376 ntBASIC2.57□□□□□ -2
YIPF1Q9Y548 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
YIPF1Q9Y548 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
YIPF1Q9Y548 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
YIPF1Q9Y548 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
YIPF1Q9Y548 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.56□□□□□ -2
YIPF1Q9Y548 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.56□□□□□ -2
YIPF1Q9Y548 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.56□□□□□ -2
YIPF1Q9Y548 U8.2-201ENST00000363156 134 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 RNU6-527P-201ENST00000363425 104 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 RNU6-1329P-201ENST00000365664 107 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 RNU6-214P-201ENST00000384130 107 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 MIR147B-201ENST00000390185 80 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 SNORA26.7-201ENST00000391288 122 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AC074117.2-201ENST00000417130 397 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AL117339.3-201ENST00000418733 162 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 PDCL2P1-201ENST00000419302 352 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 OSTCP8-201ENST00000445117 448 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.56□□□□□ -2
YIPF1Q9Y548 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.56□□□□□ -2
YIPF1Q9Y548 AC046134.1-201ENST00000514454 666 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AC109479.2-201ENST00000517842 174 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AC021269.2-201ENST00000532318 330 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.56□□□□□ -2
YIPF1Q9Y548 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.56□□□□□ -2
YIPF1Q9Y548 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.56□□□□□ -2
YIPF1Q9Y548 AL355073.2-201ENST00000612106 557 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 AC092794.2-201ENST00000620933 563 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
YIPF1Q9Y548 AC026241.1-201ENST00000517873 2142 ntBASIC2.56□□□□□ -2
YIPF1Q9Y548 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
YIPF1Q9Y548 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.55□□□□□ -2
YIPF1Q9Y548 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
YIPF1Q9Y548 SNORD56.1-201ENST00000362913 68 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 Y_RNA.212-201ENST00000364177 102 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 RNU6-336P-201ENST00000364891 107 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 SNORD81.2-201ENST00000365153 76 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
YIPF1Q9Y548 SNORD116-11-201ENST00000383882 92 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 RNU6-1013P-201ENST00000384180 107 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.55□□□□□ -2
YIPF1Q9Y548 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AL590632.1-201ENST00000424289 371 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AL365400.1-201ENST00000431854 640 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AL513124.1-201ENST00000450410 614 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AC013470.1-201ENST00000453438 462 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AMD1P1-201ENST00000457220 922 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.55□□□□□ -2
YIPF1Q9Y548 RPL23AP49-201ENST00000492925 468 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AC091951.2-201ENST00000500762 203 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AK3P2-201ENST00000507976 429 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
YIPF1Q9Y548 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 RNU6-507P-201ENST00000516045 100 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 SNORA31.6-201ENST00000516241 130 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 RNA5SP76-201ENST00000516277 87 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 SNORA31.23-201ENST00000517219 133 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 COPS8P3-201ENST00000526024 482 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.55□□□□□ -2
YIPF1Q9Y548 GLYCAM1-201ENST00000546596 285 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.55□□□□□ -2
YIPF1Q9Y548 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.55□□□□□ -2
YIPF1Q9Y548 AC100830.2-201ENST00000581636 240 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 AP000787.2-201ENST00000604432 568 ntBASIC2.55□□□□□ -2
YIPF1Q9Y548 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.55□□□□□ -2
YIPF1Q9Y548 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.54□□□□□ -2
YIPF1Q9Y548 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
YIPF1Q9Y548 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms