Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 Y_RNA.133-201ENST00000363428 110 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 SNORA29-201ENST00000384183 140 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 Y_RNA.504-201ENST00000384481 104 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6-1105P-201ENST00000384774 107 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 MTND3P2-201ENST00000438452 342 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AC015911.1-201ENST00000495111 156 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 SNORA67.7-201ENST00000516664 135 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AC007458.1-201ENST00000542812 373 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AC104581.2-201ENST00000572227 430 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AC008739.3-201ENST00000603262 127 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AL137843.1-201ENST00000605078 385 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 RPL23AP88-201ENST00000605759 454 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AC039056.2-201ENST00000622261 511 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AL078596.1-201ENST00000624856 447 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 AL450472.1-202ENST00000637286 180 ntBASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
R3HCC1Q9Y3T6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 SNORA36A-201ENST00000384221 132 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 Y_RNA.455-201ENST00000384230 98 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6-1222P-201ENST00000384615 107 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 MIR23B-201ENST00000384832 97 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6-823P-201ENST00000391042 103 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 RPL21P3-201ENST00000395517 478 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 Y_RNA.605-201ENST00000410577 105 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC009414.1-201ENST00000427200 443 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AL357552.1-201ENST00000445254 415 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AL353705.4-201ENST00000449661 238 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC146507.2-201ENST00000460608 476 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 MTATP8P1-201ENST00000467115 207 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC106707.2-201ENST00000484182 374 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 RPS27P26-201ENST00000494583 239 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC026403.1-201ENST00000518938 295 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC006600.1-201ENST00000572529 153 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC113195.1-201ENST00000579952 141 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 SNORA51-201ENST00000606420 132 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 U3.45-201ENST00000607547 219 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AL132822.1-201ENST00000617063 513 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 SCARNA4-201ENST00000629045 128 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AC012442.3-202ENST00000636742 206 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 MTND5P1-201ENST00000445440 1375 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 MTND5P16-201ENST00000460269 1703 ntBASIC3.87□□□□□ -1.79
R3HCC1Q9Y3T6 AL356274.2-201ENST00000624379 3752 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 AC008264.2-201ENST00000610193 3731 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 SNORD9-201ENST00000362566 104 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6-1285P-201ENST00000363480 105 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 Y_RNA.153-201ENST00000363615 91 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 RNU4-9P-201ENST00000364951 139 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 Y_RNA.389-201ENST00000383924 113 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 MIR190B-201ENST00000401119 79 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 snoU13.30-201ENST00000458951 104 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 TOMM22P6-201ENST00000465035 409 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 RPL22P13-201ENST00000493291 347 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 RNU7-175P-201ENST00000515915 61 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 SNORD59.2-201ENST00000516873 68 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 AC144568.1-201ENST00000520139 137 ntBASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.86□□□□□ -1.79
R3HCC1Q9Y3T6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 RNU5B-2P-201ENST00000363036 113 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 RNU6-1309P-201ENST00000363305 108 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 MIR591-201ENST00000385290 95 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 MIR767-201ENST00000390228 109 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 SNORA69.1-201ENST00000390904 137 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 MTCYBP2-201ENST00000407745 171 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 RN7SKP61-201ENST00000410642 295 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 HMGB3P2-201ENST00000411913 584 ntBASIC3.85□□□□□ -1.79
R3HCC1Q9Y3T6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms