Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC112206.4-201ENST00000515142 405 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC090821.2-201ENST00000523552 176 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AP003033.1-201ENST00000527244 415 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AP003181.2-201ENST00000528941 181 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC002400.1-201ENST00000569310 726 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 MIR4422-201ENST00000581938 83 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC105148.1-201ENST00000604961 409 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AL139286.2-201ENST00000606838 396 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC104073.3-201ENST00000610942 955 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC026585.1-201ENST00000619582 524 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC120349.3-201ENST00000624377 529 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 AC068205.3-201ENST00000636385 468 ntBASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
HHLA3Q9XRX5 MIR26B-201ENST00000362251 77 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 SNORD32B-201ENST00000364460 84 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 Y_RNA.332-201ENST00000365271 113 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 RNU6-1200P-201ENST00000384162 107 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 RNU6-296P-201ENST00000384608 107 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 SNORA12-201ENST00000391162 147 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 MTCYBP36-201ENST00000404146 440 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 RPL21P90-201ENST00000415692 466 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AL009048.1-201ENST00000450437 298 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 HMGN2P18-201ENST00000450680 270 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 snoU13.9-201ENST00000458927 103 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 RNU7-95P-201ENST00000459222 64 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC087477.1-201ENST00000465747 340 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC099513.1-201ENST00000490423 301 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 MTND4LP18-201ENST00000526864 291 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AP002453.2-201ENST00000533503 320 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC008521.1-201ENST00000587471 187 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC005786.1-201ENST00000588553 154 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AP000654.2-201ENST00000605633 586 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AC097372.5-201ENST00000623665 376 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AP002371.2-201ENST00000624450 503 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 AL157786.1-207ENST00000627771 695 ntBASIC0.9□□□□□ -2.27
HHLA3Q9XRX5 LINC02555-201ENST00000563933 1951 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL391994.1-201ENST00000254724 282 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 MIR340-201ENST00000362125 95 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 Y_RNA.18-201ENST00000362461 102 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 RNU4-15P-201ENST00000362613 141 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 MIR544A-201ENST00000384855 91 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 SNORA40.6-201ENST00000391153 128 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL357139.1-201ENST00000407792 426 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 BTF3P4-201ENST00000418852 495 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 MTND4P20-201ENST00000424125 869 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 MTND5P25-201ENST00000430499 799 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC000111.3-201ENST00000433478 193 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 ART2BP-201ENST00000453501 499 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC112204.1-201ENST00000502591 103 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC010587.1-201ENST00000505809 469 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC104806.1-201ENST00000508720 308 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 MTND3P25-201ENST00000509243 135 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 RNA5SP490-201ENST00000517141 136 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 TRAV32-201ENST00000553993 340 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC018714.1-201ENST00000605028 208 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC018889.1-201ENST00000605372 397 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC105129.3-201ENST00000605455 485 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL353770.2-201ENST00000620024 78 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AC006927.4-201ENST00000639187 543 ntBASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HHLA3Q9XRX5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 MIR302D-201ENST00000362275 68 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 RNU6-1285P-201ENST00000363480 105 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 RNU6-533P-201ENST00000384144 107 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 MIR618-201ENST00000385287 98 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 RNU6-1176P-201ENST00000390955 107 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 RAP1BP3-201ENST00000407180 549 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AP1B1P2-201ENST00000416196 106 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AL590556.1-201ENST00000423231 483 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 CR769776.1-201ENST00000441254 787 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AC091489.2-201ENST00000566263 604 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 MIR5094-201ENST00000578766 85 ntBASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.88□□□□□ -2.27
HHLA3Q9XRX5 AC073539.2-201ENST00000597113 165 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms