Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AC074344.1-201ENST00000512823 224 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 RN7SKP219-201ENST00000516825 296 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 DUXAP5-201ENST00000529668 529 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 CBX3P4-201ENST00000538909 354 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AL158211.1-201ENST00000566763 763 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AC098848.2-201ENST00000588023 330 ntBASIC1.76□□□□□ -2.13
CDH9Q9ULB4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDH9Q9ULB4 AP000568.1-201ENST00000282964 442 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 RNU6-45P-201ENST00000384471 107 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 RNU11-3P-201ENST00000391111 133 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 HMGN1P14-201ENST00000412459 517 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC009961.2-201ENST00000435771 251 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 IFNA20P-201ENST00000436840 528 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC079781.2-201ENST00000446424 169 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 MTCYBP1-201ENST00000454315 1119 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC104136.1-201ENST00000512969 394 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AP003072.2-201ENST00000527756 676 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 LRRC34P1-201ENST00000542742 915 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL360219.1-201ENST00000610230 366 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AC011155.2-201ENST00000623202 216 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 Z69720.2-201ENST00000624755 279 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 U4.7-201ENST00000638126 106 ntBASIC1.75□□□□□ -2.13
CDH9Q9ULB4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.75□□□□□ -2.13
CDH9Q9ULB4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 RNU6-1287P-201ENST00000362914 107 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 RNU6-527P-201ENST00000363425 104 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 RNU6-1060P-201ENST00000384664 107 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 RNU6-550P-201ENST00000391057 101 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 RNU6-195P-201ENST00000411352 109 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 ISCA1P6-201ENST00000427740 390 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 CBX3P6-201ENST00000430257 527 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 GPR143P-201ENST00000434155 205 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 AL122001.1-201ENST00000457027 370 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 BNIP3P25-201ENST00000596023 559 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.74□□□□□ -2.13
CDH9Q9ULB4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CDH9Q9ULB4 MTND4P23-201ENST00000447723 1363 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 RNU6-743P-201ENST00000364151 106 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 SNORA62.1-201ENST00000364287 154 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CDH9Q9ULB4 SNORA40.3-201ENST00000390964 122 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 SNORA67.5-201ENST00000391036 107 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 CYCSP46-201ENST00000423569 204 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 FTH1P25-201ENST00000447665 469 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 GAPDHP17-201ENST00000449858 1001 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 AL033528.1-201ENST00000453780 140 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
CDH9Q9ULB4 RNU6-991P-201ENST00000516168 107 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.73□□□□□ -2.13
CDH9Q9ULB4 AP001506.1-201ENST00000615444 211 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 AC063943.3-201ENST00000615562 356 ntBASIC1.73□□□□□ -2.13
CDH9Q9ULB4 RNU1-58P-201ENST00000362413 163 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 RNU6-74P-201ENST00000384235 107 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 MIR544A-201ENST00000384855 91 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 MIR597-201ENST00000384968 97 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 MIR454-201ENST00000390180 115 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 MTND3P17-201ENST00000416968 344 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 EIF4EP2-201ENST00000422816 654 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AL590556.1-201ENST00000423231 483 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 MTND2P4-201ENST00000445034 1004 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AC079448.1-201ENST00000449377 373 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AP005660.1-201ENST00000522972 293 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 AC087683.2-201ENST00000611384 326 ntBASIC1.72□□□□□ -2.13
CDH9Q9ULB4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms