Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 IGLVIV-65-201ENST00000517313 360 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC007224.1-201ENST00000564410 144 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AP001485.1-201ENST00000604799 199 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC004832.4-201ENST00000608952 331 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AL008718.3-201ENST00000610217 321 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 SNX18P1Y-201ENST00000616231 511 ntBASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXD3Q9UJU5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RNU1-63P-201ENST00000383902 164 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RNA5SP372-201ENST00000390836 115 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 MIR1193-201ENST00000408109 78 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RNA5SP38-201ENST00000410750 119 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RNU6-1135P-201ENST00000411083 103 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RPS12P10-201ENST00000427031 377 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 PHBP16-201ENST00000446318 950 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AC012671.1-201ENST00000451912 203 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RPL23AP70-201ENST00000483361 460 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 FAM27D1-201ENST00000612308 341 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AC114781.5-201ENST00000615297 108 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AL078604.3-201ENST00000615580 211 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AC091905.2-201ENST00000623143 306 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AC068205.3-201ENST00000636385 468 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 AC026241.1-201ENST00000517873 2142 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 MAPK10-303ENST00000641324 3959 ntBASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXD3Q9UJU5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AL359854.1-201ENST00000614203 1594 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 RNU4-15P-201ENST00000362613 141 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 Y_RNA.291-201ENST00000364886 113 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 Y_RNA.329-201ENST00000365209 107 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 Y_RNA.571-201ENST00000384753 98 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 HDGFP1-201ENST00000405943 252 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 PARP4P3-201ENST00000510265 317 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 MTND5P41-201ENST00000517498 206 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AC025281.1-201ENST00000567026 265 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 MIR3138-201ENST00000585238 82 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AL137843.1-201ENST00000605078 385 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AC104465.1-201ENST00000611365 139 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 MIR6891-201ENST00000618788 93 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AC018692.3-201ENST00000623929 123 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 MTND1P7-201ENST00000632801 297 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AC011266.1-201ENST00000624119 3569 ntBASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXD3Q9UJU5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
FOXD3Q9UJU5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.96□□□□□ -1.77
FOXD3Q9UJU5 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.7-201ENST00000362352 102 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.8-201ENST00000362353 102 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 RNU6-655P-201ENST00000362858 107 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.121-201ENST00000363309 113 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 RNA5SP366-201ENST00000365454 123 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 MIR186-201ENST00000384988 86 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 Y_RNA.580-201ENST00000391004 95 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 U3.40-201ENST00000408706 208 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 SNORA74C-2-201ENST00000411179 201 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 AL451074.5-201ENST00000415894 435 ntBASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXD3Q9UJU5 TOMM22P2-201ENST00000430735 237 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms