Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNU6-601P-201ENST00000384540 107 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 MIR27B-201ENST00000385129 97 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 RNA5SP252-201ENST00000391131 119 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 RNA5SP492-201ENST00000411330 114 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC009963.1-201ENST00000417265 157 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 UBE2V1P4-201ENST00000425374 344 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 RPL26P9-201ENST00000457466 433 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AL031183.1-201ENST00000457667 207 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC027176.1-201ENST00000560204 514 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 MIR4719-201ENST00000585233 84 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC019159.1-201ENST00000605094 187 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AC010378.1-201ENST00000619270 362 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 AL160413.1-201ENST00000622780 310 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 MIR6733-201ENST00000635723 61 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC007336.1-201ENST00000576365 3828 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 SNORD21-201ENST00000383953 95 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 Z96811.1-201ENST00000445880 108 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC133134.1-201ENST00000466800 359 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 RNU6-1213P-201ENST00000517075 94 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.718-201ENST00000517110 102 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC023043.3-201ENST00000593113 385 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 AC044792.1-201ENST00000593294 196 ntBASIC2.72□□□□□ -1.97
SIX4Q9UIU6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.151-201ENST00000363566 112 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 RNU6-827P-201ENST00000365553 106 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.482-201ENST00000384377 111 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 RNY4P36-201ENST00000391116 96 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AL117339.3-201ENST00000418733 162 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AF228730.4-201ENST00000421457 183 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 BPY2DP-201ENST00000422208 265 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 RPL21P2-201ENST00000440049 481 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC007677.1-201ENST00000445757 515 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC116337.1-201ENST00000509680 687 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 RNU6-1016P-201ENST00000516689 94 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 TRAV32-201ENST00000553993 340 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 LINC00933-203ENST00000559812 219 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC020895.1-201ENST00000595362 272 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC010620.2-201ENST00000600135 313 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AL161423.1-201ENST00000613700 262 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AC002064.3-201ENST00000623448 346 ntBASIC2.71□□□□□ -1.98
SIX4Q9UIU6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SIX4Q9UIU6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SIX4Q9UIU6 RNU6-78P-201ENST00000362897 107 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 RNU6-1188P-201ENST00000363795 107 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 RNU6-198P-201ENST00000384258 104 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 U3.37-201ENST00000408528 213 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AL645568.3-201ENST00000433683 316 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC236972.2-201ENST00000434979 310 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX4Q9UIU6 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SIX4Q9UIU6 BTF3P15-201ENST00000455606 336 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC018437.1-201ENST00000492214 406 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC026782.1-201ENST00000512952 449 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 Y_RNA.701-201ENST00000516812 110 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC109329.2-201ENST00000519658 482 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 HSPE1P20-201ENST00000538133 289 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC103996.1-201ENST00000555468 102 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC011890.2-201ENST00000613393 294 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC084781.2-201ENST00000615568 161 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 MIR6134-201ENST00000617606 109 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 AC126177.8-201ENST00000618339 1015 ntBASIC2.7□□□□□ -1.98
SIX4Q9UIU6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX4Q9UIU6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms