Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 U8.8-201ENST00000365399 135 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 SNORD42.2-201ENST00000365570 69 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 MIR591-201ENST00000385290 95 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 SNORA75.6-201ENST00000391318 127 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC023141.4-201ENST00000412031 328 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 RNA5SP367-201ENST00000516557 118 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 SNORA31.18-201ENST00000517043 134 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC009163.5-201ENST00000575421 637 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC090617.7-201ENST00000623952 126 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 MIR3529-201ENST00000637713 78 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 AC091152.2-201ENST00000591628 2569 ntBASIC3.16□□□□□ -1.9
DNMT3BQ9UBC3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
DNMT3BQ9UBC3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DNMT3BQ9UBC3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DNMT3BQ9UBC3 RNU1-105P-201ENST00000363470 161 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 SNORA14A-201ENST00000364773 135 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-1040P-201ENST00000383974 107 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-842P-201ENST00000384269 107 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 RPL23AP50-201ENST00000434149 455 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 MTND4P19-201ENST00000446659 478 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 MED28P2-201ENST00000475771 317 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 RN7SKP132-201ENST00000516001 208 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 ACA59.2-201ENST00000517061 156 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AC025281.1-201ENST00000567026 265 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 ELOCP29-201ENST00000588193 334 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AL162730.1-201ENST00000605734 292 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AC024581.2-201ENST00000619986 252 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 AC092608.2-201ENST00000624427 218 ntBASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
DNMT3BQ9UBC3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-227P-201ENST00000362865 103 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 Y_RNA.197-201ENST00000364004 102 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-890P-201ENST00000384121 107 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-19P-201ENST00000384718 107 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AL591034.2-201ENST00000402839 359 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-174P-201ENST00000410406 106 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RNU2-49P-201ENST00000410666 184 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC096649.2-201ENST00000416186 393 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC074117.2-201ENST00000417130 397 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 PTGES3P4-201ENST00000426243 356 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 MTND3P9-201ENST00000429526 346 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AL441985.1-201ENST00000457727 251 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC107626.1-201ENST00000471084 183 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-327P-201ENST00000516270 127 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC020661.2-201ENST00000560114 134 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC019159.1-201ENST00000605094 187 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AL121655.1-201ENST00000605811 308 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 AC097372.5-201ENST00000623665 376 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
DNMT3BQ9UBC3 MTND4P27-201ENST00000450813 1354 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 MIR449A-201ENST00000362113 91 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 SNORD56.1-201ENST00000362913 68 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 RNU6-331P-201ENST00000384724 107 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 MIR767-201ENST00000390228 109 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 MIR548P-201ENST00000408336 84 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.13□□□□□ -1.91
DNMT3BQ9UBC3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms