Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.99□□□□□ -1.77
USP35Q9P2H5 EIF4EP4-201ENST00000424916 578 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AC063976.3-201ENST00000426849 329 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AC087499.2-201ENST00000432861 149 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AL445687.1-201ENST00000439946 251 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AC010095.1-201ENST00000443543 144 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 RPL39P29-201ENST00000447779 157 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 MTND3P10-201ENST00000450967 341 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 RN7SL499P-201ENST00000481141 276 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AC114801.2-201ENST00000503825 781 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 SNORA31.26-201ENST00000517250 137 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AC115990.1-201ENST00000526957 301 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 MIR3117-201ENST00000584034 78 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AL591516.1-201ENST00000611326 274 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 AL449363.1-201ENST00000617815 186 ntBASIC3.99□□□□□ -1.77
USP35Q9P2H5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.99□□□□□ -1.77
USP35Q9P2H5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
USP35Q9P2H5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP35Q9P2H5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP35Q9P2H5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
USP35Q9P2H5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
USP35Q9P2H5 Y_RNA.301-201ENST00000364990 103 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 MIR544A-201ENST00000384855 91 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 MIR186-201ENST00000384988 86 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 RN7SKP32-201ENST00000410167 303 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AP000275.1-201ENST00000411943 390 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.98□□□□□ -1.77
USP35Q9P2H5 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 RN7SKP40-201ENST00000517211 242 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.98□□□□□ -1.77
USP35Q9P2H5 MIR4742-201ENST00000581069 85 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AC091135.1-201ENST00000585943 307 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AC078899.3-201ENST00000599065 212 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AP001836.1-201ENST00000604675 523 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AC104237.2-201ENST00000612456 443 ntBASIC3.98□□□□□ -1.77
USP35Q9P2H5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.98□□□□□ -1.77
USP35Q9P2H5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
USP35Q9P2H5 RNU6-1141P-201ENST00000364520 107 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 XGY1-201ENST00000381172 446 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 Y_RNA.390-201ENST00000383932 102 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 RNU6-692P-201ENST00000384496 107 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 RNU6-1140P-201ENST00000410517 106 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 AL030996.1-201ENST00000411430 235 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.97□□□□□ -1.77
USP35Q9P2H5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.97□□□□□ -1.77
USP35Q9P2H5 RPL21P2-201ENST00000440049 481 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.97□□□□□ -1.77
USP35Q9P2H5 SNORD109B-201ENST00000458961 67 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 SNORD109A-201ENST00000459128 67 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 AC008413.1-201ENST00000511864 177 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 RNA5SP76-201ENST00000516277 87 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
USP35Q9P2H5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.97□□□□□ -1.77
USP35Q9P2H5 AC090616.3-201ENST00000582184 217 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 AC022306.2-201ENST00000617563 647 ntBASIC3.97□□□□□ -1.77
USP35Q9P2H5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP35Q9P2H5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP35Q9P2H5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP35Q9P2H5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
USP35Q9P2H5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 RPL9P7-201ENST00000330965 580 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 RNU6-845P-201ENST00000362578 103 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 Y_RNA.88-201ENST00000363029 99 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 SNORD56.5-201ENST00000364281 72 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 U8.9-201ENST00000365667 134 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 RNU6-95P-201ENST00000384697 107 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 SNORA26.7-201ENST00000391288 122 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 GSTA11P-201ENST00000452866 669 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 AMD1P1-201ENST00000457220 922 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 RPL9P9-202ENST00000466501 579 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 RNU6-566P-201ENST00000516790 107 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.96□□□□□ -1.78
USP35Q9P2H5 CPDP1-201ENST00000579660 283 ntBASIC3.96□□□□□ -1.78
USP35Q9P2H5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP35Q9P2H5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP35Q9P2H5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP35Q9P2H5 AP000560.1-201ENST00000624150 1937 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 MIR218-1-201ENST00000384999 110 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP35Q9P2H5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 RPL23AP95-201ENST00000426806 265 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 PMCHL2-203ENST00000457791 237 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 RPL30P12-201ENST00000474666 353 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 RNU6-612P-201ENST00000516909 102 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 HPRT1P3-201ENST00000539521 576 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 AC243972.3-201ENST00000539655 198 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 MTCO3P13-201ENST00000577757 781 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms