Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Y_RNA.233-201ENST00000364407 101 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 Y_RNA.331-201ENST00000365267 102 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNA5SP240-201ENST00000365355 128 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 Y_RNA.383-201ENST00000383855 97 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNU6-1289P-201ENST00000384431 106 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNU6-1035P-201ENST00000384477 107 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 MIR613-201ENST00000385248 95 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 MIR134-201ENST00000385258 73 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNA5SP390-201ENST00000410191 113 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNU6-651P-201ENST00000411040 105 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.3□□□□□ -1.72
CNTN3Q9P232 SNORA71B-202ENST00000439232 272 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNA5SP310-201ENST00000459084 116 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 AP001324.2-201ENST00000461163 319 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 PPIAP15-201ENST00000479662 484 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 AC074198.2-201ENST00000508153 258 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 RNA5SP179-201ENST00000517284 121 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 AP005660.1-201ENST00000522972 293 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.3□□□□□ -1.72
CNTN3Q9P232 AC091167.4-201ENST00000605079 184 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 MIR6076-201ENST00000617521 113 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CNTN3Q9P232 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNTN3Q9P232 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNTN3Q9P232 AL109809.4-201ENST00000603520 2185 ntBASIC4.3□□□□□ -1.72
CNTN3Q9P232 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTN3Q9P232 MAPK10-372ENST00000641954 3413 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 ZNF962P-201ENST00000443465 3140 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC010733.2-201ENST00000589496 5702 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.29□□□□□ -1.72
CNTN3Q9P232 Y_RNA.170-201ENST00000363746 110 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 Y_RNA.291-201ENST00000364886 113 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 Y_RNA.418-201ENST00000384029 102 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 MIR1251-201ENST00000408552 70 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC244670.1-201ENST00000436879 112 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 SETP5-201ENST00000437270 562 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC083863.1-201ENST00000438811 231 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 SNORD2.1-201ENST00000458762 69 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 RPS29P26-201ENST00000477483 171 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 RPS27AP10-201ENST00000496103 208 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.29□□□□□ -1.72
CNTN3Q9P232 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC074133.1-201ENST00000515696 183 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC022559.1-201ENST00000520905 205 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC233702.2-202ENST00000562547 291 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AL713866.2-201ENST00000603579 219 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC010999.1-201ENST00000611856 324 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC021753.1-201ENST00000635724 168 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNTN3Q9P232 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC018555.1-201ENST00000567548 1980 ntBASIC4.29□□□□□ -1.72
CNTN3Q9P232 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CNTN3Q9P232 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNTN3Q9P232 RNU6-487P-201ENST00000365430 104 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 Y_RNA.435-201ENST00000384095 112 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 RNU6-918P-201ENST00000391219 106 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 RPL21P17-201ENST00000397467 475 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 SNORA3C-201ENST00000408792 125 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 HMGN2P10-201ENST00000448085 265 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC005042.3-201ENST00000453230 174 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC091021.1-201ENST00000468051 388 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 RN7SL132P-201ENST00000478131 296 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC006130.2-201ENST00000586202 326 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 KLKP1-201ENST00000595979 403 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC025946.2-201ENST00000603398 234 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AC022441.3-201ENST00000605737 136 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AL359198.2-201ENST00000611836 194 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 AL354798.1-201ENST00000622505 329 ntBASIC4.28□□□□□ -1.72
CNTN3Q9P232 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.28□□□□□ -1.72
CNTN3Q9P232 OTUD4P1-201ENST00000237841 3067 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC007656.2-201ENST00000624902 4547 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 SNORD50.2-201ENST00000365465 70 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 SNORA26.3-201ENST00000391119 136 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AP000567.1-201ENST00000406413 156 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 MIR1183-201ENST00000408856 89 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC012306.1-201ENST00000423267 114 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC112220.1-201ENST00000434628 355 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC146944.2-203ENST00000502493 354 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC139495.1-202ENST00000513164 354 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 MIR5685-201ENST00000579080 79 ntBASIC4.27□□□□□ -1.73
CNTN3Q9P232 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.27□□□□□ -1.73
CNTN3Q9P232 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNTN3Q9P232 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms