Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.15□□□□□ -1.91
EHD3Q9NZN3 MIR4444-1-201ENST00000581696 74 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 MIR4444-2-201ENST00000584390 74 ntBASIC3.15□□□□□ -1.91
EHD3Q9NZN3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EHD3Q9NZN3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 FAM35BP-202ENST00000497389 3337 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC022336.2-201ENST00000568966 2538 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.193-201ENST00000363979 102 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 MIR625-201ENST00000385047 85 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 RNA5SP494-201ENST00000410653 129 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 RPL21P2-201ENST00000440049 481 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AL358232.1-201ENST00000448030 501 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 PRSS3P4-201ENST00000453323 162 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 RNU7-4P-201ENST00000516961 62 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC010186.2-204ENST00000537668 439 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC024153.1-201ENST00000603103 365 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC124312.5-201ENST00000604451 268 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 U6.105-201ENST00000637379 88 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 AC241585.2-209ENST00000638217 143 ntBASIC3.14□□□□□ -1.91
EHD3Q9NZN3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
EHD3Q9NZN3 CUL1P1-201ENST00000509510 2425 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 RNU6-874P-201ENST00000362390 105 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 RNA5SP119-201ENST00000362715 117 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.176-201ENST00000363815 109 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.452-201ENST00000384202 108 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 RNU6-784P-201ENST00000384330 106 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 Y_RNA.574-201ENST00000384766 95 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 MIR183-201ENST00000384958 110 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 MTCO3P29-201ENST00000432119 779 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC008155.2-201ENST00000464337 397 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 MRPS35P2-201ENST00000508242 191 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 SNORA40.14-201ENST00000516543 86 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC131281.1-201ENST00000522984 164 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC022616.4-201ENST00000522985 181 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AL451007.1-201ENST00000595491 289 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC008739.3-201ENST00000603262 127 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC024220.1-201ENST00000603675 484 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 HSPE1P7-201ENST00000604681 321 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 AC073657.2-201ENST00000605661 303 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 MIR6134-201ENST00000617606 109 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.13□□□□□ -1.91
EHD3Q9NZN3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
EHD3Q9NZN3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 RNU1-100P-201ENST00000365255 165 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 SNORD14.1-201ENST00000365609 90 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 RNU6-700P-201ENST00000391043 107 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 RPS4XP3-201ENST00000398541 413 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AP000275.1-201ENST00000411943 390 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AC007098.1-201ENST00000420122 367 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 CST9LP2-201ENST00000437612 320 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 RPL26P9-201ENST00000457466 433 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AC040926.1-201ENST00000530195 238 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AP002404.1-201ENST00000532005 451 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AL391261.3-201ENST00000557194 520 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AC006006.1-201ENST00000603082 144 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 PRR13P7-201ENST00000605538 430 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 MIR6075-201ENST00000620782 95 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EHD3Q9NZN3 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 AC093908.1-201ENST00000623125 8092 ntBASIC3.12□□□□□ -1.91
EHD3Q9NZN3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms