Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC010099.1-201ENST00000455434 375 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 RPL26P9-201ENST00000457466 433 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 SRIP1-201ENST00000489235 288 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC018437.1-201ENST00000492214 406 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC116337.1-201ENST00000509680 687 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 RNA5SP367-201ENST00000516557 118 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC026241.1-201ENST00000517873 2142 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AP000867.2-201ENST00000532468 320 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC103996.1-201ENST00000555468 102 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 LINC00933-203ENST00000559812 219 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 HMGN2P15-201ENST00000585707 270 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC008739.2-201ENST00000597006 317 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AL355598.1-201ENST00000604169 202 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AL161423.1-201ENST00000613700 262 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AL161629.2-201ENST00000615347 275 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC010297.1-201ENST00000623948 149 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 SNORD62.1-201ENST00000362541 86 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-428P-201ENST00000362942 107 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1188P-201ENST00000363795 107 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1011P-201ENST00000384668 107 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 MTCYBP4-201ENST00000401524 249 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 RNA5SP181-201ENST00000410246 98 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC096664.2-201ENST00000411843 406 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 MTCO2P27-201ENST00000420740 428 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 USP9YP30-201ENST00000430729 455 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC011816.1-201ENST00000441346 546 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1016P-201ENST00000516689 94 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 RNU1-54P-201ENST00000517181 120 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 TRAV32-201ENST00000553993 340 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC011890.2-201ENST00000613393 294 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.138-201ENST00000363462 102 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-1059P-201ENST00000363752 98 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.431-201ENST00000384086 102 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 MIR634-201ENST00000385208 97 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-325P-201ENST00000411132 105 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AL030996.1-201ENST00000411430 235 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 COTL1P1-201ENST00000422309 375 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AL645568.3-201ENST00000433683 316 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 BTF3P15-201ENST00000455606 336 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 MTCO3P10-201ENST00000455912 772 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 RPL30P15-201ENST00000457129 321 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 RPL7P42-201ENST00000481005 679 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC005741.1-201ENST00000511094 432 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC026782.1-201ENST00000512952 449 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.670-201ENST00000516255 105 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC124303.1-201ENST00000605703 360 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC019193.3-201ENST00000609144 554 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 AC110079.1-202ENST00000635213 138 ntBASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMARCAL1Q9NZC9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 Y_RNA.404-201ENST00000383978 102 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-43P-201ENST00000384302 107 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 MIR517A-201ENST00000385001 87 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 SNORA75.4-201ENST00000391278 119 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 RNU6-1050P-201ENST00000410388 107 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 NDUFS5P4-201ENST00000412983 318 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AL354751.2-201ENST00000415471 210 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 FTH1P25-201ENST00000447665 469 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC027575.1-201ENST00000481064 460 ntBASIC2.7□□□□□ -1.98
SMARCAL1Q9NZC9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms