Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RNU6-4P-201ENST00000384205 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-5P-201ENST00000384238 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-3P-201ENST00000384314 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 Y_RNA.480-201ENST00000384364 102 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-16P-201ENST00000384385 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-15P-201ENST00000384534 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-2-201ENST00000384627 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-29P-201ENST00000384637 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 SNORA41-201ENST00000384675 132 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-9-201ENST00000384776 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-33P-201ENST00000384793 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-1328P-201ENST00000410938 106 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 MTND1P2-201ENST00000430604 821 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU7-66P-201ENST00000459469 62 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 GZMAP1-201ENST00000503054 631 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC023141.11-201ENST00000508864 202 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 SNORA14.1-201ENST00000516113 141 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 BTF3P12-201ENST00000519620 469 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 RNU6-6P-201ENST00000606623 107 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AL121757.2-201ENST00000611223 313 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 AC090617.10-201ENST00000624308 134 ntBASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NLGN3Q9NZ94 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 OR56A5-201ENST00000340110 738 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 RNU6-1072P-201ENST00000384703 107 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 RNU6-443P-201ENST00000384780 107 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 CR769767.1-201ENST00000436337 346 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AC133134.1-201ENST00000466800 359 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 RNU6-237P-201ENST00000515985 71 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 RNU6-1069P-201ENST00000516612 133 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AP004607.1-201ENST00000524456 203 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 Z82243.1-201ENST00000609432 473 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 FAM157A-202ENST00000615155 405 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 SCARNA4-202ENST00000625402 129 ntBASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.31□□□□□ -2.04
NLGN3Q9NZ94 AC121333.1-201ENST00000567488 2709 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 RNU6-78P-201ENST00000362897 107 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 U8.8-201ENST00000365399 135 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 RNU6-19P-201ENST00000384718 107 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AL162578.1-201ENST00000406202 378 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 BX276092.3-201ENST00000424182 230 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 PTGES3P4-201ENST00000426243 356 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC096638.1-201ENST00000444678 216 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 RPL23AP49-201ENST00000492925 468 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 SNORA43.2-201ENST00000516652 128 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC023050.3-201ENST00000541142 333 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC023824.2-201ENST00000566185 400 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 MYL12BP1-201ENST00000569826 507 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 MIR3199-1-201ENST00000582434 88 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 MIR5692C1-201ENST00000585309 91 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC008121.1-201ENST00000603244 268 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 AC006504.8-201ENST00000621046 635 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 Z82209.1-201ENST00000422141 2135 ntBASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NLGN3Q9NZ94 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 AC069528.2-201ENST00000624849 1991 ntBASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 RAP1BP3-201ENST00000407180 549 ntBASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 RNU4-26P-201ENST00000410270 107 ntBASIC2.29□□□□□ -2.04
NLGN3Q9NZ94 SNORD56-201ENST00000413522 71 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms