Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 SNORA73.2-201ENST00000364946 201 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RNU6-487P-201ENST00000365430 104 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.358-201ENST00000365491 99 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RNU6-805P-201ENST00000365643 106 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 SNORA29-201ENST00000384183 140 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 DPH3P2-201ENST00000422618 250 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AL365496.1-201ENST00000426885 215 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC009414.1-201ENST00000427200 443 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RPL21P40-201ENST00000428586 483 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 HMGN2P31-201ENST00000432430 273 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 MTND3P2-201ENST00000438452 342 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RBMY2UP-201ENST00000453474 324 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AF186996.7-201ENST00000492781 209 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RPL22P13-201ENST00000493291 347 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC023632.4-201ENST00000517783 191 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 IGKV2-26-201ENST00000518305 343 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC074050.1-201ENST00000563247 211 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 MIR3186-201ENST00000577404 85 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC010928.2-201ENST00000588017 287 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 RPS15AP11-201ENST00000594193 385 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AL391813.1-201ENST00000603098 260 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC124312.5-201ENST00000604451 268 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AL138825.1-201ENST00000618587 192 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC007792.1-201ENST00000623023 402 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 SCARNA4-201ENST00000629045 128 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC012442.3-202ENST00000636742 206 ntBASIC3.11□□□□□ -1.91
RLIMQ9NVW2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.11□□□□□ -1.91
RLIMQ9NVW2 AC091152.2-201ENST00000591628 2569 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 SNORD14.1-201ENST00000365609 90 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 MIR554-201ENST00000384874 96 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 UBA52P6-201ENST00000399822 382 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 MTCYBP2-201ENST00000407745 171 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC114482.1-201ENST00000418010 247 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 RPS3AP12-201ENST00000443616 753 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AL358232.1-201ENST00000448030 501 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AL133547.1-201ENST00000448546 220 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC112492.4-201ENST00000456549 352 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 snoU13.6-201ENST00000458785 104 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 RNU7-170P-201ENST00000459303 61 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC112771.1-201ENST00000463581 102 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 RAC1P5-201ENST00000512182 576 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 MIR1254-2-201ENST00000579553 63 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC113195.1-201ENST00000579952 141 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 VN1R91P-201ENST00000594377 169 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AL356157.2-201ENST00000605122 111 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC069200.1-201ENST00000609511 323 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AL078596.1-201ENST00000624856 447 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AC138305.3-201ENST00000624988 240 ntBASIC3.1□□□□□ -1.91
RLIMQ9NVW2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RLIMQ9NVW2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
RLIMQ9NVW2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
RLIMQ9NVW2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.09□□□□□ -1.91
RLIMQ9NVW2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RLIMQ9NVW2 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 RNU6-222P-201ENST00000362438 107 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.106-201ENST00000363189 100 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 SNORA51.11-201ENST00000384442 131 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.557-201ENST00000384680 107 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 RNU6-823P-201ENST00000391042 103 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 SAR1AP2-201ENST00000392696 594 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.592-201ENST00000410274 109 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 AL590135.1-201ENST00000422215 156 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 AC019205.3-201ENST00000424573 156 ntBASIC3.09□□□□□ -1.91
RLIMQ9NVW2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.09□□□□□ -1.91
RLIMQ9NVW2 GOT2P5-201ENST00000433995 546 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms