Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 Y_RNA.451-201ENST00000384200 100 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 RNU6-22P-201ENST00000384355 107 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 Y_RNA.524-201ENST00000384564 100 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 Y_RNA.561-201ENST00000384694 100 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATG3Q9NT62 SNORA12.2-201ENST00000391040 156 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 RNU6-918P-201ENST00000391219 106 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 AL096701.2-201ENST00000416920 238 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG3Q9NT62 RNU7-87P-201ENST00000459343 62 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 S100A11P2-201ENST00000467589 312 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 COX6CP14-201ENST00000469580 174 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG3Q9NT62 RNU6-1012P-201ENST00000516606 109 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 SNORA31.18-201ENST00000517043 134 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 AC109479.2-201ENST00000517842 174 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 AC025755.1-201ENST00000521306 278 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 MIR5004-201ENST00000579078 107 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 Y_RNA.772-201ENST00000606692 102 ntBASIC4.47□□□□□ -1.69
ATG3Q9NT62 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG3Q9NT62 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG3Q9NT62 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG3Q9NT62 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG3Q9NT62 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
ATG3Q9NT62 AL353743.1-202ENST00000431724 1695 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG3Q9NT62 RNU6-384P-201ENST00000364900 104 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 Y_RNA.304-201ENST00000365011 112 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 UBA52P6-201ENST00000399822 382 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 RNU6-1135P-201ENST00000411083 103 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATG3Q9NT62 AL592045.1-201ENST00000429867 352 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 SNORA31.22-201ENST00000517204 135 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG3Q9NT62 TRAV37-201ENST00000553906 342 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 EIF4BP1-201ENST00000554881 351 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 FAM60BP-201ENST00000578364 658 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 uc_338.32-201ENST00000615087 172 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 MIR6852-201ENST00000621699 66 ntBASIC4.46□□□□□ -1.7
ATG3Q9NT62 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG3Q9NT62 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
ATG3Q9NT62 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG3Q9NT62 AL353746.1-201ENST00000566293 6881 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 Y_RNA.233-201ENST00000364407 101 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 Y_RNA.286-201ENST00000364813 102 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 RNU6-882P-201ENST00000391025 103 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 RNU2-37P-201ENST00000410695 177 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 MTCO1P39-201ENST00000426148 480 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 MLLT10P2-201ENST00000506434 249 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 MIR892C-201ENST00000516410 77 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 RN7SKP289-201ENST00000517244 295 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG3Q9NT62 HMGB1P14-201ENST00000557424 591 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 BDH2P1-201ENST00000602288 736 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 Z99571.1-201ENST00000636677 394 ntBASIC4.45□□□□□ -1.7
ATG3Q9NT62 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG3Q9NT62 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
ATG3Q9NT62 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG3Q9NT62 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG3Q9NT62 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG3Q9NT62 MFSD8-233ENST00000641482 4860 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 RNA5SP42-201ENST00000364278 115 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 AL357075.1-201ENST00000404107 726 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 HSPE1P26-201ENST00000405341 275 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 SNORD56-201ENST00000413522 71 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 RPL26P6-201ENST00000440913 438 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 AC084357.1-201ENST00000473404 255 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 AC074133.1-201ENST00000515696 183 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 AP006245.1-201ENST00000522549 120 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 AC103996.1-201ENST00000555468 102 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 MIR4659A-201ENST00000580269 81 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 MIR4276-201ENST00000584832 70 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 KLKP1-201ENST00000595979 403 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.44□□□□□ -1.7
ATG3Q9NT62 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG3Q9NT62 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.43□□□□□ -1.7
ATG3Q9NT62 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 Z83843.1-201ENST00000604070 3685 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
ATG3Q9NT62 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATG3Q9NT62 SNORA22C-201ENST00000384614 134 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 RNU2-43P-201ENST00000410306 190 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.43□□□□□ -1.7
ATG3Q9NT62 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.43□□□□□ -1.7
ATG3Q9NT62 RN7SKP210-201ENST00000459176 261 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 RN7SL93P-201ENST00000463035 293 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 AC087477.1-201ENST00000465747 340 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 RN7SL594P-201ENST00000470590 287 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 AL049830.2-201ENST00000480072 201 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 RNA5SP471-201ENST00000516971 106 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 RNU6-1231P-201ENST00000517185 103 ntBASIC4.43□□□□□ -1.7
ATG3Q9NT62 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms