Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RPL21P5-201ENST00000554662 472 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC016727.1-205ENST00000605437 569 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL133173.2-201ENST00000614270 90 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 MIR7844-201ENST00000616161 122 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RNU1-58P-201ENST00000362413 163 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 Y_RNA.22-201ENST00000362492 102 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RNU1-17P-201ENST00000363022 152 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RNU6-1164P-201ENST00000364428 107 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RNU5E-7P-201ENST00000365290 117 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RNA5SP501-201ENST00000410990 112 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 EEF1A1P40-201ENST00000412883 573 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 AC009310.1-201ENST00000414414 451 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 AC000111.3-201ENST00000433478 193 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 MTND3P25-201ENST00000509243 135 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RNU6-1220P-201ENST00000517126 108 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 MRPS36P3-201ENST00000519284 130 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 AC005771.1-201ENST00000585581 349 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 AP000942.3-201ENST00000603702 160 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 AL121992.2-201ENST00000606262 256 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 RMST_7.1-201ENST00000621935 268 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 AC097372.5-201ENST00000623665 376 ntBASIC1.41□□□□□ -2.18
TREX1Q9NSU2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
TREX1Q9NSU2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
TREX1Q9NSU2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 RNU6-78P-201ENST00000362897 107 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 RNU6-116P-201ENST00000384042 109 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 MIR544A-201ENST00000384855 91 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 SNORA17.3-201ENST00000391159 129 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 VN1R108P-201ENST00000431580 830 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 RPS15AP10-201ENST00000432472 382 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AL357134.1-201ENST00000445848 426 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC116562.3-201ENST00000506136 177 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC093259.1-201ENST00000509755 300 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC068587.5-201ENST00000528506 175 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.4□□□□□ -2.19
TREX1Q9NSU2 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 AC103987.3-201ENST00000582071 292 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 RMST_6.1-201ENST00000611980 203 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 MIR1248-201ENST00000629190 106 ntBASIC1.4□□□□□ -2.19
TREX1Q9NSU2 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.576-201ENST00000384781 102 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 MTATP6P16-201ENST00000434543 526 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC104806.1-201ENST00000508720 308 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC009646.1-201ENST00000510455 318 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 SCARNA24.1-201ENST00000516465 137 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC018630.3-201ENST00000542637 96 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC002400.1-201ENST00000569310 726 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC137800.2-201ENST00000574375 120 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC091135.1-201ENST00000585943 307 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AL136363.2-201ENST00000604173 851 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC027449.1-201ENST00000608890 407 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AL159153.1-201ENST00000619688 317 ntBASIC1.39□□□□□ -2.19
TREX1Q9NSU2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TREX1Q9NSU2 AC233981.2-201ENST00000611524 1614 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 MIR424-201ENST00000362227 98 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 RNA5SP99-201ENST00000364020 114 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AC068050.1-201ENST00000394891 380 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.598-201ENST00000410480 95 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 RNU6-387P-201ENST00000411331 105 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AC104850.1-201ENST00000435940 476 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 KATNBL1P3-201ENST00000443475 909 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AL360221.1-201ENST00000445989 335 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.38□□□□□ -2.19
TREX1Q9NSU2 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 MTCYBP40-201ENST00000509390 1135 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AP001893.2-201ENST00000526949 202 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AC073539.2-201ENST00000597113 165 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 U6.114-201ENST00000636407 96 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 AC099654.13-201ENST00000639774 207 ntBASIC1.38□□□□□ -2.19
TREX1Q9NSU2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms