Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 SNORD21-201ENST00000383953 95 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RNU6-1227P-201ENST00000383981 107 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RNU6-72P-201ENST00000384285 79 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 SNORD15B-201ENST00000384714 146 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RNU6-19P-201ENST00000384718 107 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 Y_RNA.579-201ENST00000390939 94 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AL139095.1-201ENST00000404326 391 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC093151.1-201ENST00000427711 313 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC005534.2-201ENST00000431047 433 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AL031274.1-201ENST00000450334 232 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RPL23AP45-201ENST00000476406 468 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 Y_RNA.708-201ENST00000516950 96 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AP004607.1-201ENST00000524456 203 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC093249.1-201ENST00000567049 203 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC018462.2-201ENST00000605375 395 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC124303.1-201ENST00000605703 360 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC133104.2-201ENST00000615272 193 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 PISRT1.1-201ENST00000616930 107 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 AC090617.7-201ENST00000623952 126 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 MTND5P30-201ENST00000452896 1731 ntBASIC3.16□□□□□ -1.9
VPS45Q9NRW7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
VPS45Q9NRW7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VPS45Q9NRW7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.15□□□□□ -1.9
VPS45Q9NRW7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.187-201ENST00000363918 113 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.394-201ENST00000383942 103 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 RNU6-1304P-201ENST00000411374 106 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AL030996.1-201ENST00000411430 235 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 RPS15AP10-201ENST00000432472 382 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 snoU109.2-201ENST00000459316 135 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC116655.1-201ENST00000508324 901 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC026782.1-201ENST00000512952 449 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC091826.1-201ENST00000514065 313 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 CYP2C61P-201ENST00000604072 290 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC019193.3-201ENST00000609144 554 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AC090971.5-201ENST00000621102 293 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 AL669831.3-213ENST00000636676 183 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 KPNA2P1-201ENST00000458289 1591 ntBASIC3.15□□□□□ -1.91
VPS45Q9NRW7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
VPS45Q9NRW7 MTND4P23-201ENST00000447723 1363 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.151-201ENST00000363566 112 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 RNU6-487P-201ENST00000365430 104 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 SNORA75.4-201ENST00000391278 119 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 RNU6-1050P-201ENST00000410388 107 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC016831.2-201ENST00000417179 352 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS45Q9NRW7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS45Q9NRW7 PCMTD1P1-201ENST00000455560 355 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 RPL30P15-201ENST00000457129 321 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 SNORD5.1-201ENST00000458800 75 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC027575.1-201ENST00000481064 460 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC018437.1-201ENST00000492214 406 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC005741.1-201ENST00000511094 432 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS45Q9NRW7 CBX3P7-201ENST00000532876 502 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 MIR4435-1-201ENST00000582552 80 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC080078.3-201ENST00000605407 463 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AL121917.1-203ENST00000605534 577 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AP000654.2-201ENST00000605633 586 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC244517.12-201ENST00000623581 663 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 AC138627.2-201ENST00000624202 601 ntBASIC3.14□□□□□ -1.91
VPS45Q9NRW7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
VPS45Q9NRW7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AL136360.1-201ENST00000503377 1900 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 AC026241.1-201ENST00000517873 2142 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS45Q9NRW7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.13□□□□□ -1.91
VPS45Q9NRW7 Y_RNA.146-201ENST00000363549 102 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms