Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 DUXAP11-201ENST00000603858 526 ntBASIC-0.61□□□□□ -2.51
SMCO4Q9NRQ5 SNRPGP20-201ENST00000604477 205 ntBASIC-0.61□□□□□ -2.51
SMCO4Q9NRQ5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.61□□□□□ -2.51
SMCO4Q9NRQ5 AC097065.2-201ENST00000608159 533 ntBASIC-0.61□□□□□ -2.51
SMCO4Q9NRQ5 AC008133.2-201ENST00000624540 351 ntBASIC-0.61□□□□□ -2.51
SMCO4Q9NRQ5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.61□□□□□ -2.51
SMCO4Q9NRQ5 AC027514.1-201ENST00000588561 1603 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 MIR499A-201ENST00000384903 122 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 MTND1P28-201ENST00000435623 950 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 snoU13.30-201ENST00000458951 104 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-863P-201ENST00000515989 104 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 AP003049.1-201ENST00000529418 457 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 AC007834.2-201ENST00000536310 343 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 BNIP3P6-201ENST00000549284 499 ntBASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.62□□□□□ -2.51
SMCO4Q9NRQ5 AL390237.1-201ENST00000404226 1415 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-878P-201ENST00000384578 110 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AC007435.1-201ENST00000421086 415 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 MTND5P2-201ENST00000442927 1142 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AL049830.1-201ENST00000468034 425 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AC116655.1-201ENST00000508324 901 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 SNORA40.12-201ENST00000516329 111 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 RNA5SP490-201ENST00000517141 136 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-840P-201ENST00000517275 65 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AC023157.2-201ENST00000540596 141 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AC004853.1-201ENST00000604902 698 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AC011374.2-201ENST00000607135 526 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AL603758.1-201ENST00000618654 241 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 AL359757.2-201ENST00000624309 274 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 MIR1248-201ENST00000629190 106 ntBASIC-0.63□□□□□ -2.51
SMCO4Q9NRQ5 MIR330-201ENST00000362196 94 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 SNORA51.6-201ENST00000384151 125 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-793P-201ENST00000384233 104 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-177P-201ENST00000411257 104 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 SNRPGP9-201ENST00000456025 225 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 SUMO1P1-201ENST00000497904 306 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AC116347.2-201ENST00000514912 523 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-237P-201ENST00000515985 71 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 GAS5-AS1-201ENST00000602767 694 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AL357075.2-201ENST00000614906 189 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AC078938.1-201ENST00000620993 318 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 MIR1295B-201ENST00000636144 60 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AL590396.4-201ENST00000636779 956 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 AC107982.1-201ENST00000507171 1300 ntBASIC-0.64□□□□□ -2.51
SMCO4Q9NRQ5 MIR186-201ENST00000384988 86 ntBASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 COX6CP10-201ENST00000416832 224 ntBASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 RPL23AP95-201ENST00000426806 265 ntBASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 SUMO2P18-201ENST00000518873 252 ntBASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 AC011979.2-201ENST00000527568 352 ntBASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.65□□□□□ -2.51
SMCO4Q9NRQ5 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 RNU6-167P-201ENST00000384292 106 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AL451054.2-201ENST00000420896 202 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 PSMA6P3-201ENST00000428242 164 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 MTND1P20-201ENST00000430341 950 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC000111.3-201ENST00000433478 193 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 MTND2P21-201ENST00000436242 1042 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC091874.1-201ENST00000511402 339 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC093012.1-202ENST00000549403 582 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 RNU4-5P-201ENST00000607255 135 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC116165.2-201ENST00000616705 206 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 MIR6515-201ENST00000619843 57 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 AC097372.5-201ENST00000623665 376 ntBASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.66□□□□□ -2.52
SMCO4Q9NRQ5 SNORD116-13-201ENST00000384408 92 ntBASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 AC092685.1-201ENST00000447960 1243 ntBASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.67□□□□□ -2.52
SMCO4Q9NRQ5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
SMCO4Q9NRQ5 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.68□□□□□ -2.52
SMCO4Q9NRQ5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.68□□□□□ -2.52
SMCO4Q9NRQ5 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.68□□□□□ -2.52
SMCO4Q9NRQ5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms