Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 MIR335-201ENST00000362173 94 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 RNU6-78P-201ENST00000362897 107 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.462-201ENST00000384268 102 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 MIR1183-201ENST00000408856 89 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 RN7SKP111-201ENST00000410349 271 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AC098614.2-201ENST00000426040 255 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 RN7SL594P-201ENST00000470590 287 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 SNORA31.18-201ENST00000517043 134 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AP002770.2-201ENST00000543613 532 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 TRAV28-201ENST00000557548 323 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 MIR4300-201ENST00000581016 96 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AC060766.3-201ENST00000591442 263 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AC009779.6-201ENST00000603972 165 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AL162274.2-201ENST00000614406 332 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 MIR6076-201ENST00000617521 113 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AC099506.2-201ENST00000623074 221 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AP003355.3-201ENST00000623465 114 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 U6.99-201ENST00000637524 83 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 AC010733.2-201ENST00000589496 5702 ntBASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM7Q9NR12 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.54-201ENST00000362766 105 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.143-201ENST00000363520 106 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 SNORA80A-201ENST00000363922 136 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.785-201ENST00000384290 109 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AL603910.2-201ENST00000407268 136 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AC006989.1-201ENST00000427212 131 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 Z75741.1-201ENST00000446793 314 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 RPL23AP62-201ENST00000463396 453 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 RPL27AP5-201ENST00000469428 449 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 RN7SL429P-201ENST00000479090 223 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 RN7SL489P-201ENST00000486185 223 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 RN7SL327P-201ENST00000488659 223 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 IGKV2-26-201ENST00000518305 343 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 CASP1P1-201ENST00000526345 212 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AC026333.2-201ENST00000542164 106 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AC130289.1-201ENST00000577321 73 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AC136601.2-201ENST00000604356 474 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 RN7SL853P-201ENST00000617250 223 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 AL450472.1-202ENST00000637286 180 ntBASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.89□□□□□ -1.79
PDLIM7Q9NR12 HSPA8P1-201ENST00000425843 1833 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC022336.2-201ENST00000568966 2538 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC007785.2-201ENST00000598627 1916 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 Y_RNA.65-201ENST00000362846 100 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 RNU6-72P-201ENST00000384285 79 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 RNY3P4-201ENST00000384428 101 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 RPS4XP3-201ENST00000398541 413 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 RPL21P40-201ENST00000428586 483 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AL591043.1-201ENST00000432461 424 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 Z82188.1-201ENST00000436709 154 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 SNRPEP9-201ENST00000436794 238 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 SETP5-201ENST00000437270 562 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 HMGN2P20-201ENST00000437531 273 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 PRELID3BP1-201ENST00000457142 540 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 RNA5SP310-201ENST00000459084 116 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 TOMM22P6-201ENST00000465035 409 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 ANXA2P1-201ENST00000505539 926 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC010265.1-201ENST00000513509 211 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 SNORA31.6-201ENST00000516241 130 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 RNA5SP341-201ENST00000516261 117 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 SNORA81.3-201ENST00000517283 198 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC244205.2-202ENST00000635781 342 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 AC068647.1-201ENST00000489539 2265 ntBASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM7Q9NR12 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 LINC02555-201ENST00000563933 1951 ntBASIC3.87□□□□□ -1.79
PDLIM7Q9NR12 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms