Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC079598.5-201ENST00000547460 117 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC105137.2-201ENST00000569073 466 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AL117336.2-201ENST00000602435 335 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC113139.1-201ENST00000605049 239 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC016727.1-205ENST00000605437 569 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 MIR3976-201ENST00000606807 139 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 MIR1302-1-201ENST00000637932 143 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HINT3Q9NQE9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.59□□□□□ -2
HINT3Q9NQE9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HINT3Q9NQE9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.58□□□□□ -2
HINT3Q9NQE9 RNU6-1010P-201ENST00000362757 107 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 RNU6-227P-201ENST00000362865 103 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 U8.9-201ENST00000365667 134 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 Y_RNA.482-201ENST00000384377 111 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 MIR521-1-201ENST00000384902 87 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 MIR23A-201ENST00000385245 73 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.58□□□□□ -2
HINT3Q9NQE9 DAP3P1-201ENST00000441522 278 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 AL031659.1-201ENST00000447075 539 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 RPL39P29-201ENST00000447779 157 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.58□□□□□ -2
HINT3Q9NQE9 RN7SL297P-201ENST00000483161 293 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.58□□□□□ -2
HINT3Q9NQE9 RPL22P13-201ENST00000493291 347 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.58□□□□□ -2
HINT3Q9NQE9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.58□□□□□ -2
HINT3Q9NQE9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.58□□□□□ -2
HINT3Q9NQE9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.58□□□□□ -2
HINT3Q9NQE9 AC023043.3-201ENST00000593113 385 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 AC018889.1-201ENST00000605372 397 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 AC104985.2-201ENST00000620598 500 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 MTND5P30-201ENST00000452896 1731 ntBASIC2.58□□□□□ -2
HINT3Q9NQE9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HINT3Q9NQE9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.58□□□□□ -2
HINT3Q9NQE9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
HINT3Q9NQE9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.57□□□□□ -2
HINT3Q9NQE9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
HINT3Q9NQE9 RNU6-593P-201ENST00000364716 112 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 SNORD32A-201ENST00000364805 84 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 U8.8-201ENST00000365399 135 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 RNU6-43P-201ENST00000384302 107 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 RNU6-601P-201ENST00000384540 107 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 SNORA26.7-201ENST00000391288 122 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 RNU2-23P-201ENST00000410545 195 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AC097463.2-201ENST00000421074 142 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AC104332.2-201ENST00000429959 156 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AL133396.1-201ENST00000432048 687 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.57□□□□□ -2
HINT3Q9NQE9 GSTA11P-201ENST00000452866 669 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 SMURF2P1-201ENST00000514992 481 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 RNA5SP112-201ENST00000515937 99 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 RNU6-1016P-201ENST00000516689 94 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AC109329.1-201ENST00000518744 317 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AC107016.2-201ENST00000547968 190 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
HINT3Q9NQE9 AL356157.2-201ENST00000605122 111 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 MIR8076-201ENST00000611401 83 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AC135507.2-201ENST00000612443 309 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AC007792.1-201ENST00000623023 402 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 AL359757.2-201ENST00000624309 274 ntBASIC2.57□□□□□ -2
HINT3Q9NQE9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
HINT3Q9NQE9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.57□□□□□ -2
HINT3Q9NQE9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.57□□□□□ -2
HINT3Q9NQE9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
HINT3Q9NQE9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.57□□□□□ -2
HINT3Q9NQE9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.57□□□□□ -2
HINT3Q9NQE9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.56□□□□□ -2
HINT3Q9NQE9 AC002543.1-201ENST00000299783 1954 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 Z75746.1-201ENST00000440243 2080 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.56□□□□□ -2
HINT3Q9NQE9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HINT3Q9NQE9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.56□□□□□ -2
HINT3Q9NQE9 RNU6-529P-201ENST00000363383 104 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 UBA52P6-201ENST00000399822 382 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.56□□□□□ -2
HINT3Q9NQE9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.56□□□□□ -2
HINT3Q9NQE9 Z82205.1-201ENST00000428456 297 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 USP9YP30-201ENST00000430729 455 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.56□□□□□ -2
HINT3Q9NQE9 FTH1P25-201ENST00000447665 469 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.56□□□□□ -2
HINT3Q9NQE9 SNORD5.1-201ENST00000458800 75 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.56□□□□□ -2
HINT3Q9NQE9 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
HINT3Q9NQE9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.56□□□□□ -2
HINT3Q9NQE9 AC103975.1-201ENST00000482506 483 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms