Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 RNU7-63P-201ENST00000459054 62 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 MIR892C-201ENST00000516410 77 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 SNORA31.18-201ENST00000517043 134 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 MIR3616-201ENST00000584070 92 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 MIR4765-201ENST00000585007 77 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC008749.1-201ENST00000597650 306 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AL354950.2-201ENST00000617939 290 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AL162373.1-201ENST00000620433 407 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 SDR42E1P4-201ENST00000620894 481 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC068792.1-201ENST00000621354 417 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC139792.3-201ENST00000623525 224 ntBASIC1.74□□□□□ -2.13
LHX9Q9NQ69 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LHX9Q9NQ69 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 RNU6-552P-201ENST00000362869 119 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 RNU6-942P-201ENST00000363002 107 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 Y_RNA.517-201ENST00000384551 106 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 RNU6-1127P-201ENST00000384580 107 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 SNORD70.1-201ENST00000391007 85 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 RNU6-903P-201ENST00000391270 109 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 RNU2-3P-201ENST00000410144 191 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 RNU4-46P-201ENST00000410818 138 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL353621.1-201ENST00000418219 243 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 NDUFB1P2-201ENST00000449477 176 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC112771.1-201ENST00000463581 102 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC023141.11-201ENST00000508864 202 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 SMURF2P1-201ENST00000514992 481 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 OR11H5P-201ENST00000554039 926 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 MIR3683-201ENST00000580847 82 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 AC012507.3-201ENST00000603556 477 ntBASIC1.73□□□□□ -2.13
LHX9Q9NQ69 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
LHX9Q9NQ69 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RNU6-996P-201ENST00000365438 107 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RNU6-748P-201ENST00000384648 107 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RNU6-220P-201ENST00000390919 107 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 SNORA16.2-201ENST00000390991 127 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RNU6-780P-201ENST00000391030 104 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 CALM2P3-201ENST00000400429 449 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 MIR1294-201ENST00000408503 142 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RNU6-607P-201ENST00000411283 108 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RPL30P4-201ENST00000429309 333 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 MTCO2P7-201ENST00000446518 666 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC073415.1-201ENST00000449240 153 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL356010.1-201ENST00000456364 102 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 SCARNA18-201ENST00000459004 134 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RN7SL274P-201ENST00000492268 272 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC107401.1-201ENST00000503426 685 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC074344.1-201ENST00000512823 224 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC105417.1-201ENST00000514691 285 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 HIF1AP1-201ENST00000553642 175 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC004223.2-201ENST00000590309 544 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL136363.2-201ENST00000604173 851 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL670379.10-201ENST00000604330 253 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL670379.9-201ENST00000605428 253 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL021997.1-201ENST00000605757 193 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LHX9Q9NQ69 AL359854.1-201ENST00000614203 1594 ntBASIC1.72□□□□□ -2.13
LHX9Q9NQ69 RBBP8P1-201ENST00000449447 1844 ntBASIC1.71□□□□□ -2.14
LHX9Q9NQ69 RNU6-393P-201ENST00000384475 107 ntBASIC1.71□□□□□ -2.14
LHX9Q9NQ69 SNORD116-20-201ENST00000384529 92 ntBASIC1.71□□□□□ -2.14
LHX9Q9NQ69 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
LHX9Q9NQ69 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.71□□□□□ -2.14
LHX9Q9NQ69 RNU2-29P-201ENST00000410423 189 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 383.7 ms