Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.394-201ENST00000383942 103 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 RNA5SP354-201ENST00000391247 136 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 RNU6-1304P-201ENST00000411374 106 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VTA1Q9NP79 Z82205.1-201ENST00000428456 297 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC099799.1-201ENST00000439809 192 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC243964.1-201ENST00000441814 261 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AL137792.2-201ENST00000443484 235 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 RPL17P19-201ENST00000489069 552 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 SCARNA16.2-201ENST00000516520 172 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC009812.2-201ENST00000517657 457 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 7SK.7-201ENST00000603504 247 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC090617.7-201ENST00000623952 126 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 AL137790.1-201ENST00000634283 177 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VTA1Q9NP79 AC000403.1-201ENST00000613696 3585 ntBASIC3.53□□□□□ -1.84
VTA1Q9NP79 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.53□□□□□ -1.84
VTA1Q9NP79 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNU6-1115P-201ENST00000362490 106 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNU6-1059P-201ENST00000363752 98 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNU6-142P-201ENST00000384019 107 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNU6-474P-201ENST00000384243 107 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNU6-1222P-201ENST00000384615 107 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 MIR767-201ENST00000390228 109 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VTA1Q9NP79 MTCYBP2-201ENST00000407745 171 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 MTND3P9-201ENST00000429526 346 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VTA1Q9NP79 AC025750.2-201ENST00000442609 450 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 UBE2DNL-203ENST00000474922 222 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 RPS26P21-201ENST00000475397 348 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNA5SP384-201ENST00000516615 116 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 RNU6-988P-201ENST00000519081 107 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 IGHV3-76-201ENST00000522465 295 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.52□□□□□ -1.85
VTA1Q9NP79 MIR3171-201ENST00000584270 74 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 uc_338.14-201ENST00000613162 166 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 AC241585.2-209ENST00000638217 143 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 AC002543.1-201ENST00000299783 1954 ntBASIC3.52□□□□□ -1.85
VTA1Q9NP79 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 RNU6-331P-201ENST00000384724 107 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC018865.2-201ENST00000423631 129 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 AL035666.1-201ENST00000446195 348 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC092185.1-201ENST00000491371 97 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC109329.1-201ENST00000518744 317 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC009318.2-201ENST00000610917 651 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 AC007792.1-201ENST00000623023 402 ntBASIC3.51□□□□□ -1.85
VTA1Q9NP79 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VTA1Q9NP79 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC007496.3-201ENST00000624987 3443 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VTA1Q9NP79 RNU6-1141P-201ENST00000364520 107 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 RNU1-115P-201ENST00000365329 160 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 Y_RNA.428-201ENST00000384078 102 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 Y_RNA.463-201ENST00000384271 102 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 RNU6-622P-201ENST00000384272 103 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 Y_RNA.577-201ENST00000384794 101 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 RNU2-49P-201ENST00000410666 184 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 BX276092.3-201ENST00000424182 230 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 RPL23AP95-201ENST00000426806 265 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC078809.1-201ENST00000427601 140 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 OSTCP8-201ENST00000445117 448 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AL513124.1-201ENST00000450410 614 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 RN7SKP210-201ENST00000459176 261 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 RPS27P29-201ENST00000463110 252 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.5□□□□□ -1.85
VTA1Q9NP79 RPL30P10-201ENST00000488148 337 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 AC022493.2-201ENST00000506122 481 ntBASIC3.5□□□□□ -1.85
VTA1Q9NP79 Y_RNA.711-201ENST00000516993 102 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms