Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 RN7SL504P-201ENST00000494496 287 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AC096745.1-201ENST00000509945 370 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 RNU6-273P-201ENST00000516937 96 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 CPDP1-201ENST00000579660 283 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 ZNF861P-201ENST00000588126 639 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 AC093913.1-201ENST00000614178 329 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHMP1AQ9HD42 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 Y_RNA.390-201ENST00000383932 102 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 SNORA54-201ENST00000384281 123 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MT-TL1-201ENST00000386347 75 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MTND3P9-201ENST00000429526 346 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MRPL50P4-201ENST00000446432 475 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MTCO1P29-201ENST00000496868 288 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 HSPE1P4-201ENST00000550617 308 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AC026464.5-201ENST00000562497 722 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MIR5004-201ENST00000579078 107 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MIR5739-201ENST00000619803 80 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP1AQ9HD42 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 Y_RNA.72-201ENST00000362894 103 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 Y_RNA.151-201ENST00000363566 112 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 Y_RNA.160-201ENST00000363677 92 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 DEFA7P-201ENST00000382676 285 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 RNVU1-14-201ENST00000384770 164 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 MIR95-201ENST00000385072 81 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 RNU6-876P-201ENST00000391295 104 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL356967.1-201ENST00000406305 431 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 RN7SKP61-201ENST00000410642 295 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 MTCO3P46-201ENST00000425787 232 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 YME1L1P1-201ENST00000429435 297 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL133396.1-201ENST00000432048 687 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AC244670.1-201ENST00000436879 112 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 RN7SL807P-201ENST00000470923 297 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AC074250.1-201ENST00000511117 192 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 PTP4A1P4-201ENST00000512479 322 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AC115990.1-201ENST00000526957 301 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 IMMP1LP2-201ENST00000552954 492 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 MYL12BP1-201ENST00000569826 507 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 MIR4742-201ENST00000581069 85 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 MIR3605-201ENST00000583214 100 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL161756.2-201ENST00000604597 246 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL356157.2-201ENST00000605122 111 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 SNORA43.4-201ENST00000629559 138 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL133216.2-202ENST00000634512 349 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 AL450472.1-202ENST00000637286 180 ntBASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP1AQ9HD42 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 MIR26A1-201ENST00000362205 77 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 snoU2_19.1-201ENST00000362361 80 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 RNU6-227P-201ENST00000362865 103 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 Y_RNA.279-201ENST00000364763 95 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 RNU6-851P-201ENST00000384565 107 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 RPL35AP12-201ENST00000425362 338 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC078809.1-201ENST00000427601 140 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC006946.1-201ENST00000429106 328 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AL161788.1-201ENST00000441805 169 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC130509.1-201ENST00000464158 433 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 RPL31P58-201ENST00000469001 379 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 HMGB1P35-201ENST00000503360 598 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
CHMP1AQ9HD42 SNORA31.16-201ENST00000516773 139 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms