Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 Y_RNA.771-201ENST00000598668 102 ntBASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 Y_RNA.789-201ENST00000622480 102 ntBASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
VRTNQ9H8Y1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
VRTNQ9H8Y1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 MIR767-201ENST00000390228 109 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 ELOCP21-201ENST00000412558 336 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 RAB28P5-201ENST00000427490 651 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 AC069285.2-201ENST00000440210 275 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 snoU13.14-201ENST00000459372 104 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 AC087441.2-201ENST00000529141 262 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 CYP4A43P-201ENST00000568156 121 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 ARF4P1-201ENST00000605447 541 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 AC092593.1-201ENST00000515413 1815 ntBASIC4.46□□□□□ -1.7
VRTNQ9H8Y1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 Y_RNA.40-201ENST00000362645 93 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 RNU6-727P-201ENST00000363592 107 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 RNU6-1020P-201ENST00000363684 107 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 SNORA70C-201ENST00000384538 135 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 RNA5SP354-201ENST00000391247 136 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 COX6CP10-201ENST00000416832 224 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 AC092017.2-201ENST00000427600 362 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 IFNA11P-201ENST00000446352 526 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 RNA5SP154-201ENST00000516193 111 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 AL137843.1-201ENST00000605078 385 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 AC069200.1-201ENST00000609511 323 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 uc_338.14-201ENST00000613162 166 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 PCGEM1.1-201ENST00000613431 131 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
VRTNQ9H8Y1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 AP001486.2-201ENST00000561652 5113 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 Y_RNA.101-201ENST00000363154 102 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 RNA5SP475-201ENST00000410568 110 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 HLA-N-201ENST00000437516 135 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 RPL23AP62-201ENST00000463396 453 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 RN7SL604P-201ENST00000492589 296 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 AC011921.3-201ENST00000605540 361 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 AC091932.3-201ENST00000624223 323 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 AC011266.1-201ENST00000624119 3569 ntBASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.44□□□□□ -1.7
VRTNQ9H8Y1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 SNORA14A-201ENST00000364773 135 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 MIR93-201ENST00000385024 80 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 RPS26P8-201ENST00000393490 348 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 AIMP1P2-201ENST00000425294 312 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 AC006011.1-201ENST00000442758 349 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 RN7SL585P-201ENST00000470538 280 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 AL121594.1-201ENST00000475906 575 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 RPL7P47-201ENST00000497299 556 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 RNU6-789P-201ENST00000517105 102 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 PARP1P2-201ENST00000556806 195 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 AC018692.3-201ENST00000623929 123 ntBASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRTNQ9H8Y1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.42□□□□□ -1.7
VRTNQ9H8Y1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VRTNQ9H8Y1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms