Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 CYP2C59P-201ENST00000457790 269 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 Y_RNA.695-201ENST00000516715 107 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 AC243960.4-201ENST00000600532 288 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 AC073410.2-201ENST00000603240 332 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 RMST_4.1-201ENST00000616886 107 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 RMST_7.1-201ENST00000621935 268 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 AC097372.5-201ENST00000623665 376 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 SEPT14P19-203ENST00000633205 211 ntBASIC2.09□□□□□ -2.07
RPAP3Q9H6T3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RPAP3Q9H6T3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNU1-23P-201ENST00000363361 144 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNU6-715P-201ENST00000365204 103 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNU6-45P-201ENST00000384471 107 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 MIR186-201ENST00000384988 86 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNU6-607P-201ENST00000411283 108 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 CYCSP33-201ENST00000414485 327 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC009238.1-201ENST00000442165 424 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC009237.6-201ENST00000446969 424 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 MTCO3P9-201ENST00000506989 781 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 SNORA4.4-201ENST00000515921 135 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNU2-53P-201ENST00000516257 147 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 RNA5SP503-201ENST00000517047 117 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC109329.1-201ENST00000518744 317 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 OR11H5P-201ENST00000554039 926 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 ANP32BP3-201ENST00000559213 706 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC093249.1-201ENST00000567049 203 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC023043.2-201ENST00000589678 1026 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AL158063.1-201ENST00000615349 536 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 AC090517.3-201ENST00000625170 141 ntBASIC2.08□□□□□ -2.08
RPAP3Q9H6T3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 RNU6-348P-201ENST00000384386 107 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 RAP1BP3-201ENST00000407180 549 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 RPL23AP36-201ENST00000413895 458 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC074117.2-201ENST00000417130 397 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AL358453.1-201ENST00000422522 250 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AL365400.1-201ENST00000431854 640 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AL596276.1-201ENST00000434465 418 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 MTND4P32-201ENST00000437189 1237 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 MIR4498-201ENST00000577599 66 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 MIR4528-201ENST00000577763 90 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 uc_338.15-201ENST00000615470 191 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC008147.4-201ENST00000617570 1204 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC072046.2-201ENST00000618366 268 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC099842.1-201ENST00000619919 596 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC136475.10-201ENST00000620253 385 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC022079.1-201ENST00000621546 602 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AC009161.2-201ENST00000624626 138 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 AL390237.1-201ENST00000404226 1415 ntBASIC2.07□□□□□ -2.08
RPAP3Q9H6T3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 RNA5SP138-201ENST00000365098 114 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 RNU4-48P-201ENST00000365559 182 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AL158823.1-201ENST00000418441 478 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AL669831.1-202ENST00000428504 417 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 MTATP6P17-201ENST00000431030 672 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 GTF2IP13-201ENST00000438487 386 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 C1DP4-201ENST00000455429 424 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC006026.2-201ENST00000457376 180 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC074344.1-201ENST00000512823 224 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC104136.1-201ENST00000512969 394 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC087752.4-201ENST00000605911 462 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC008945.2-201ENST00000606056 604 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 MIR3974-201ENST00000637126 96 ntBASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.06□□□□□ -2.08
RPAP3Q9H6T3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-212P-201ENST00000362642 104 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-37P-201ENST00000362692 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-11P-201ENST00000364234 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms