Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RPS27AP14-201ENST00000422868 454 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL590556.1-201ENST00000423231 483 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 RPL22P17-201ENST00000438729 315 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC007969.2-201ENST00000441891 191 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC130509.1-201ENST00000464158 433 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 RPL9P9-202ENST00000466501 579 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AP000797.1-201ENST00000478870 387 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 TRBV12-1-201ENST00000479785 344 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC098799.1-201ENST00000504752 800 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 RNU1-86P-201ENST00000516108 154 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 RNU1-107P-201ENST00000516617 154 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC084364.2-201ENST00000546924 395 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AC005786.1-201ENST00000588553 154 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AP000654.2-201ENST00000605633 586 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL139286.2-201ENST00000606838 396 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 AL021879.1-201ENST00000611756 288 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 RMST_7.1-201ENST00000621935 268 ntBASIC0.89□□□□□ -2.27
VCX3BQ9H321 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.89□□□□□ -2.27
VCX3BQ9H321 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
VCX3BQ9H321 RNU4-1-201ENST00000363925 141 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 SNORA70B-201ENST00000384210 135 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 RNU6-39P-201ENST00000384344 107 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 RNU6-1065P-201ENST00000384513 106 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 MIR634-201ENST00000385208 97 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 RAP1BP3-201ENST00000407180 549 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 EIF1P1-201ENST00000421436 341 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 CALM2P2-201ENST00000428512 440 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 MTND1P20-201ENST00000430341 950 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 MTND5P2-201ENST00000442927 1142 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.88□□□□□ -2.27
VCX3BQ9H321 AL122001.1-201ENST00000457027 370 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 AC093852.1-201ENST00000503587 266 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 SNORD116-28-201ENST00000516123 91 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.88□□□□□ -2.27
VCX3BQ9H321 MTND2P7-201ENST00000521337 640 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.88□□□□□ -2.27
VCX3BQ9H321 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.88□□□□□ -2.27
VCX3BQ9H321 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.88□□□□□ -2.27
VCX3BQ9H321 AL158050.2-201ENST00000605336 568 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 AC211469.2-201ENST00000605461 205 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 RMST_4.1-201ENST00000616886 107 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 AC026585.1-201ENST00000619582 524 ntBASIC0.88□□□□□ -2.27
VCX3BQ9H321 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VCX3BQ9H321 LINC02555-201ENST00000563933 1951 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 Y_RNA.18-201ENST00000362461 102 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 SNORD32B-201ENST00000364460 84 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC245047.4-201ENST00000433189 144 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 RPL37P21-201ENST00000435890 276 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 RNU6-333P-201ENST00000459117 107 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 UBE2DNL-203ENST00000474922 222 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 RPL26P26-201ENST00000480251 434 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 MIR449C-201ENST00000516047 92 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 RNA5SP490-201ENST00000517141 136 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC087441.2-201ENST00000529141 262 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 DNAJC19P9-201ENST00000555084 351 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 MIR4421-201ENST00000578133 69 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 MIR4509-3-201ENST00000578671 94 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 MIR4509-2-201ENST00000583920 94 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC105148.1-201ENST00000604961 409 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC025754.2-201ENST00000606491 432 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC104073.3-201ENST00000610942 955 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.87□□□□□ -2.27
VCX3BQ9H321 MIR4509-1-201ENST00000618224 94 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AL607023.1-201ENST00000620045 248 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC131159.1-201ENST00000621854 213 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 AC068205.3-201ENST00000636385 468 ntBASIC0.87□□□□□ -2.27
VCX3BQ9H321 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
VCX3BQ9H321 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VCX3BQ9H321 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
VCX3BQ9H321 RNU6-112P-201ENST00000363599 104 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 RNU6-660P-201ENST00000364566 109 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 Y_RNA.332-201ENST00000365271 113 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 SNORA24.1-201ENST00000384401 135 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 SNORD115.1-201ENST00000391109 76 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 SNORA12-201ENST00000391162 147 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC114491.1-201ENST00000416095 246 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 PIGFP2-201ENST00000421400 651 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC007283.2-201ENST00000424739 197 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.86□□□□□ -2.27
VCX3BQ9H321 UBE2V1P8-201ENST00000437166 265 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 RNU1-131P-201ENST00000458943 161 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 MTCO2P29-201ENST00000465212 189 ntBASIC0.86□□□□□ -2.27
VCX3BQ9H321 AC112204.1-201ENST00000502591 103 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms