Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-1064P-201ENST00000410626 104 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AL159169.1-201ENST00000421119 127 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AC011998.1-201ENST00000433403 117 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 RN7SL860P-201ENST00000473738 223 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 KC877373.1-201ENST00000479066 408 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 RN7SKP164-201ENST00000516138 266 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AP004607.1-201ENST00000524456 203 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AL161713.1-201ENST00000555538 145 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AC127455.1-201ENST00000565496 145 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 MIR5571-201ENST00000577998 113 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 MIR4679-2-201ENST00000578358 77 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 MIR3613-201ENST00000579844 87 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AC005520.5-201ENST00000613926 164 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AC004467.1-201ENST00000615678 330 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AC011944.2-201ENST00000624440 683 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 U6.99-201ENST00000637524 83 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 MIR331-201ENST00000362302 94 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-1245P-201ENST00000411130 106 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AL157831.1-201ENST00000426134 473 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 PHBP16-201ENST00000446318 950 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC006026.2-201ENST00000457376 180 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 RNU7-197P-201ENST00000458836 62 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 U8.19-201ENST00000459095 133 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 RN7SL98P-201ENST00000462271 300 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 RN7SL810P-201ENST00000493031 276 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 UBE2CP3-201ENST00000502715 450 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC025554.1-201ENST00000505641 188 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 MLLT10P2-201ENST00000506434 249 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC018448.1-201ENST00000552843 316 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC009127.3-201ENST00000570531 403 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC069294.1-201ENST00000608397 350 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC083809.1-201ENST00000615051 472 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AC090132.2-201ENST00000615881 347 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 AL034408.1-202ENST00000636088 415 ntBASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUCKS1Q9H1E3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 FAM35DP-201ENST00000323387 2712 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 RNA5SP267-201ENST00000364893 126 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-356P-201ENST00000384140 107 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-763P-201ENST00000390865 106 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 RPS29P17-201ENST00000430795 166 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 EEF1B2P7-201ENST00000451177 676 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AL132838.2-201ENST00000492041 314 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 CYCSP39-201ENST00000565821 309 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 MIR3921-201ENST00000577308 85 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AC011603.4-201ENST00000611325 277 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 MIR6129-201ENST00000616087 109 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AC024581.2-201ENST00000619986 252 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUCKS1Q9H1E3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC018555.1-201ENST00000567548 1980 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-942P-201ENST00000363002 107 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-103P-201ENST00000363686 107 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 snoU2_19.4-201ENST00000364329 80 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AL356867.1-201ENST00000429623 299 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC112220.1-201ENST00000434628 355 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 RPS29P19-201ENST00000479709 171 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 RPS26P15-201ENST00000488067 348 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC021269.2-201ENST00000532318 330 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC090877.1-201ENST00000561418 344 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AL356157.2-201ENST00000605122 111 ntBASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.55□□□□□ -1.68
NUCKS1Q9H1E3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms