Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC097463.2-201ENST00000421074 142 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 AL591043.1-201ENST00000432461 424 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.84□□□□□ -1.95
USP44Q9H0E7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
USP44Q9H0E7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.84□□□□□ -1.95
USP44Q9H0E7 AP001324.2-201ENST00000461163 319 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 RPL36AP48-201ENST00000485521 314 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 SCARNA3-201ENST00000517097 143 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.84□□□□□ -1.95
USP44Q9H0E7 AF235103.2-201ENST00000525753 346 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.84□□□□□ -1.95
USP44Q9H0E7 AC060780.3-201ENST00000589464 80 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 AC092747.3-201ENST00000603769 301 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 APOOP1-201ENST00000604695 592 ntBASIC2.84□□□□□ -1.95
USP44Q9H0E7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.84□□□□□ -1.95
USP44Q9H0E7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USP44Q9H0E7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
USP44Q9H0E7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.83□□□□□ -1.96
USP44Q9H0E7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USP44Q9H0E7 OR56A5-201ENST00000340110 738 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.83□□□□□ -1.96
USP44Q9H0E7 SNORD56-201ENST00000413522 71 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.83□□□□□ -1.96
USP44Q9H0E7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 BX276092.3-201ENST00000424182 230 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC009296.1-201ENST00000443146 155 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC013470.1-201ENST00000453438 462 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC087884.1-201ENST00000469738 328 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RN7SL429P-201ENST00000479090 223 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RN7SL489P-201ENST00000486185 223 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RN7SL327P-201ENST00000488659 223 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 SNORA31.6-201ENST00000516241 130 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RNU6-1069P-201ENST00000516612 133 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 BTF3P12-201ENST00000519620 469 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC105137.2-201ENST00000569073 466 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RPS15AP11-201ENST00000594193 385 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AL356157.2-201ENST00000605122 111 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AL121917.1-203ENST00000605534 577 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 RN7SL853P-201ENST00000617250 223 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC006504.8-201ENST00000621046 635 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC090617.10-201ENST00000624308 134 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 MTND4P27-201ENST00000450813 1354 ntBASIC2.83□□□□□ -1.96
USP44Q9H0E7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USP44Q9H0E7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.82□□□□□ -1.96
USP44Q9H0E7 Y_RNA.157-201ENST00000363638 102 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.82□□□□□ -1.96
USP44Q9H0E7 MIR221-201ENST00000385135 110 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 FO393413.1-201ENST00000402892 195 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 RPL31P58-201ENST00000469001 379 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AC083904.1-201ENST00000487828 231 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AC098799.2-201ENST00000509466 868 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AP002770.2-201ENST00000543613 532 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.82□□□□□ -1.96
USP44Q9H0E7 OR1M4P-201ENST00000589199 287 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 BNIP3P25-201ENST00000596023 559 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.82□□□□□ -1.96
USP44Q9H0E7 RPL23AP88-201ENST00000605759 454 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AC007792.1-201ENST00000623023 402 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 AC100810.6-201ENST00000638068 285 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.82□□□□□ -1.96
USP44Q9H0E7 RNU6-37P-201ENST00000362692 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-11P-201ENST00000364234 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 Y_RNA.373-201ENST00000365600 103 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-25P-201ENST00000383873 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-1-201ENST00000383898 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-48P-201ENST00000384161 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-36P-201ENST00000384172 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-4P-201ENST00000384205 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-5P-201ENST00000384238 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-622P-201ENST00000384272 103 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-3P-201ENST00000384314 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-16P-201ENST00000384385 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-15P-201ENST00000384534 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 Y_RNA.530-201ENST00000384587 101 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-2-201ENST00000384627 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-29P-201ENST00000384637 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-9-201ENST00000384776 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-33P-201ENST00000384793 107 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 FGF7P8-201ENST00000402994 292 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RN7SKP223-201ENST00000410582 62 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 RNU6-1148P-201ENST00000410992 104 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC009161.1-201ENST00000417306 376 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC008571.1-201ENST00000467232 300 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AC116353.2-201ENST00000505332 712 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 SMURF2P1-201ENST00000514992 481 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 SNORA31.23-201ENST00000517219 133 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 SNRPGP18-201ENST00000553000 214 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 MIR3945-201ENST00000581853 98 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 BNIP3P16-201ENST00000589779 534 ntBASIC2.81□□□□□ -1.96
USP44Q9H0E7 AL356280.1-201ENST00000603614 379 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms