Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC013244.2-201ENST00000603396 103 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRIM4Q9C037 RNU6-942P-201ENST00000363002 107 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 SNORA4.3-201ENST00000365564 137 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 Y_RNA.534-201ENST00000384599 112 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 RNU6-296P-201ENST00000384608 107 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 RNU2-23P-201ENST00000410545 195 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 USP9YP33-201ENST00000412220 421 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRIM4Q9C037 HMGB1P30-201ENST00000492455 606 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 AC079140.2-201ENST00000506193 142 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 RNU6-1315P-201ENST00000517187 99 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 DEFB108E-201ENST00000524692 240 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 AC092325.1-201ENST00000566449 554 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 AC005786.1-201ENST00000588553 154 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TRIM4Q9C037 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.92□□□□□ -2.26
TRIM4Q9C037 AL163152.1-201ENST00000642001 374 ntBASIC0.92□□□□□ -2.26
TRIM4Q9C037 Y_RNA.597-201ENST00000410463 100 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 MTCO1P17-201ENST00000411522 491 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 CST2P1-201ENST00000425770 87 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 UBE2V1P8-201ENST00000437166 265 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 RNU6-953P-201ENST00000459154 107 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 snoU13.14-201ENST00000459372 104 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.91□□□□□ -2.26
TRIM4Q9C037 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.91□□□□□ -2.26
TRIM4Q9C037 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.91□□□□□ -2.26
TRIM4Q9C037 AC112198.4-201ENST00000515450 351 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 RNU7-40P-201ENST00000516397 64 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
TRIM4Q9C037 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
TRIM4Q9C037 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.91□□□□□ -2.26
TRIM4Q9C037 AP002802.2-201ENST00000605877 235 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 AC006270.3-201ENST00000605967 1036 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 AC123767.1-202ENST00000620407 817 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 AC004808.1-201ENST00000627671 721 ntBASIC0.91□□□□□ -2.26
TRIM4Q9C037 RNU6-212P-201ENST00000362642 104 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 RNU6-26P-201ENST00000383985 107 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC003071.1-201ENST00000451219 789 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 RNA5SP121-201ENST00000516537 101 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 DEFB108A-201ENST00000530110 222 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.9□□□□□ -2.27
TRIM4Q9C037 RAB11AP2-201ENST00000545905 639 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AL157871.3-201ENST00000557231 293 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC137800.2-201ENST00000574375 120 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 MIR5094-201ENST00000578766 85 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 MIR3937-201ENST00000580135 106 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC005776.1-201ENST00000603164 290 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC112220.2-201ENST00000605513 533 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC099785.1-201ENST00000605697 437 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 MIR8087-201ENST00000612745 78 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC063943.3-201ENST00000615562 356 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC120349.3-201ENST00000624377 529 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.9□□□□□ -2.27
TRIM4Q9C037 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TRIM4Q9C037 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
TRIM4Q9C037 AC100821.1-201ENST00000523153 2479 ntBASIC0.9□□□□□ -2.27
TRIM4Q9C037 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 RNU6-35P-201ENST00000384530 107 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 RN7SKP200-201ENST00000410564 320 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC009518.2-201ENST00000418056 731 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AL589872.1-201ENST00000426602 288 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 MTND4P15-201ENST00000437913 1033 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 MTCO1P27-201ENST00000448269 226 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 RPS27P1-201ENST00000450552 247 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 MTND1P3-201ENST00000484956 952 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 CENPUP1-201ENST00000526649 1202 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 CYP3A52P-201ENST00000563326 91 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC112191.3-201ENST00000604371 277 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.89□□□□□ -2.27
TRIM4Q9C037 MTND5P42-201ENST00000637720 498 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 AC099654.8-201ENST00000637757 681 ntBASIC0.89□□□□□ -2.27
TRIM4Q9C037 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRIM4Q9C037 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRIM4Q9C037 Y_RNA.33-201ENST00000362591 102 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 SNORA75B-201ENST00000384053 137 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TRIM4Q9C037 RNU6-278P-201ENST00000390945 109 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 MIR1284-201ENST00000408337 120 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.88□□□□□ -2.27
TRIM4Q9C037 RPL21P111-201ENST00000418453 477 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.88□□□□□ -2.27
TRIM4Q9C037 RPS15AP10-201ENST00000432472 382 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms