Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
GABARAPL3Q9BY60 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 snoU2_19.1-201ENST00000362361 80 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RNU6-552P-201ENST00000362869 119 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 Y_RNA.77-201ENST00000362962 107 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RNU6-1285P-201ENST00000363480 105 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RNU6-1103P-201ENST00000384150 107 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RNU6-611P-201ENST00000384276 104 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 Y_RNA.480-201ENST00000384364 102 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 MIR544A-201ENST00000384855 91 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RNU6-903P-201ENST00000391270 109 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RNA5SP450-201ENST00000411206 102 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC096920.1-201ENST00000423991 241 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 RPS15AP10-201ENST00000432472 382 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC109479.2-201ENST00000517842 174 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 COPS8P3-201ENST00000526024 482 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC022616.8-201ENST00000533569 253 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AP000873.5-201ENST00000533906 236 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC010928.2-201ENST00000588017 287 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AL359314.1-201ENST00000616913 261 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC009509.4-201ENST00000619202 509 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 AC005609.4-201ENST00000625071 447 ntBASIC1.59□□□□□ -2.15
GABARAPL3Q9BY60 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
GABARAPL3Q9BY60 ELL2P3-201ENST00000457883 1602 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 RNU6-336P-201ENST00000364891 107 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 Y_RNA.399-201ENST00000383955 105 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 Y_RNA.553-201ENST00000384670 102 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AL117339.3-201ENST00000418733 162 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 MTATP6P17-201ENST00000431030 672 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 GPM6BP3-201ENST00000442797 145 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 MTCO1P19-201ENST00000443487 500 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 PRELID3BP1-201ENST00000457142 540 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 SLC25A15P5-201ENST00000508033 253 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 RNU6-377P-201ENST00000515965 102 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 RNU5F-2P-201ENST00000516066 82 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AL137161.1-201ENST00000532231 390 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 MTATP6P3-201ENST00000581686 676 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 BNIP3P16-201ENST00000589779 534 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC078899.2-201ENST00000595282 212 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC119751.7-201ENST00000600494 245 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AL391646.1-201ENST00000603860 190 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC002044.1-201ENST00000606707 158 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 AC104073.3-201ENST00000610942 955 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.58□□□□□ -2.16
GABARAPL3Q9BY60 RNU6-428P-201ENST00000362942 107 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 RNU6-266P-201ENST00000364225 107 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 RNA5SP387-201ENST00000364226 106 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 Y_RNA.333-201ENST00000365274 102 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 MIR9-3-201ENST00000385084 90 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 SNORA40.19-201ENST00000390846 128 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 SNORA46.1-201ENST00000391069 153 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 AC068050.1-201ENST00000394891 380 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 RPS29P13-201ENST00000402041 169 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 MIR1262-201ENST00000408276 93 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 MIR1294-201ENST00000408503 142 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 MTCO2P19-201ENST00000427513 598 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 IFNA20P-201ENST00000436840 528 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 RPL23AP3-201ENST00000453844 468 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 MTND2P33-201ENST00000506452 1031 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 MIR5583-1-201ENST00000580941 59 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 VN1R107P-201ENST00000601784 209 ntBASIC1.57□□□□□ -2.16
GABARAPL3Q9BY60 AC008536.2-201ENST00000607284 349 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms