Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 AL158163.2-201ENST00000619110 700 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SCAPERQ9BY12 AC023934.1-201ENST00000574529 2389 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 AC245060.5-201ENST00000610778 3293 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 RNU6-1010P-201ENST00000362757 107 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 DHFRP6-201ENST00000401776 268 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC138623.1-201ENST00000418060 216 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.17□□□□□ -2.38
SCAPERQ9BY12 GAPDHP17-201ENST00000449858 1001 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC121161.1-201ENST00000510606 652 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 MTND5P13-201ENST00000513046 1079 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 RNA5SP481-201ENST00000516814 122 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC090615.1-201ENST00000577519 154 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 Z83818.1-201ENST00000603584 150 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC107304.1-201ENST00000604229 296 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AL353765.1-201ENST00000605514 183 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC087588.2-201ENST00000617667 426 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC013470.4-201ENST00000619978 986 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AC090617.9-201ENST00000623751 147 ntBASIC0.17□□□□□ -2.38
SCAPERQ9BY12 AL356776.1-201ENST00000406574 447 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 RPS27AP8-201ENST00000452665 445 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 FABP5P15-201ENST00000453566 214 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AC023194.1-201ENST00000493084 308 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 SNORA31.4-201ENST00000516049 129 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 RNA5SP255-201ENST00000516370 107 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 RNU6-885P-201ENST00000516607 104 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AL356057.1-201ENST00000533798 831 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.16□□□□□ -2.38
SCAPERQ9BY12 AL161798.1-201ENST00000604630 131 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 RMST_4.1-201ENST00000616886 107 ntBASIC0.16□□□□□ -2.38
SCAPERQ9BY12 RNU6-1078P-201ENST00000364522 103 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 RNU6-945P-201ENST00000383947 107 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 RNU6-910P-201ENST00000390844 107 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 MRPS36P1-201ENST00000421291 307 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 MTCO1P3-201ENST00000429327 192 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.15□□□□□ -2.39
SCAPERQ9BY12 AC023050.2-201ENST00000544968 387 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SCAPERQ9BY12 AC023824.3-201ENST00000569003 562 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 BNIP3P31-201ENST00000604515 566 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SCAPERQ9BY12 AC120349.3-201ENST00000624377 529 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 MIR1248-201ENST00000629190 106 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 U6.99-201ENST00000637524 83 ntBASIC0.15□□□□□ -2.39
SCAPERQ9BY12 RNU4-79P-201ENST00000362764 141 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 MIR942-201ENST00000401111 86 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 ISCA1P1-201ENST00000426679 387 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 AC004854.1-201ENST00000440356 349 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.14□□□□□ -2.39
SCAPERQ9BY12 RNU1-131P-201ENST00000458943 161 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.14□□□□□ -2.39
SCAPERQ9BY12 AC097473.1-201ENST00000508142 408 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.14□□□□□ -2.39
SCAPERQ9BY12 RNU6-165P-201ENST00000517170 99 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.14□□□□□ -2.39
SCAPERQ9BY12 AC019226.1-201ENST00000625666 515 ntBASIC0.14□□□□□ -2.39
SCAPERQ9BY12 Y_RNA.548-201ENST00000384656 105 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 RNU6-1300P-201ENST00000391046 108 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 RNU6-754P-201ENST00000391166 107 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 MIR1265-201ENST00000408444 86 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC092423.1-201ENST00000430165 186 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AL606489.2-201ENST00000433886 234 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC099677.2-201ENST00000436385 175 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 RNU6-333P-201ENST00000459117 107 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 RNA5SP437-201ENST00000517249 129 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC137800.2-201ENST00000574375 120 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 MIR29B2-201ENST00000385055 81 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 MTCO2P12-201ENST00000427426 682 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 USP9YP22-201ENST00000438971 294 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 MTCO3P18-201ENST00000440206 761 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 MTCO3P7-201ENST00000510008 774 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC093012.1-202ENST00000549403 582 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 MIR4305-201ENST00000583252 102 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC105148.1-201ENST00000604961 409 ntBASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.13□□□□□ -2.39
SCAPERQ9BY12 AC010615.1-201ENST00000594254 1764 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 Y_RNA.390-201ENST00000383932 102 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 RNU6-700P-201ENST00000391043 107 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.12□□□□□ -2.39
SCAPERQ9BY12 BRK1P2-201ENST00000442875 223 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.12□□□□□ -2.39
SCAPERQ9BY12 MIR4782-201ENST00000577987 79 ntBASIC0.12□□□□□ -2.39
SCAPERQ9BY12 AC093788.1-201ENST00000609356 927 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms